HHsearch alignment for GI: 254780795 and conserved domain: cd05601
>cd05601 STKc_CRIK STKc_CRIK: Serine/Threonine Kinases (STKs), Citron Rho-interacting kinase (CRIK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CRIK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CRIK is also called citron kinase. It contains a catalytic domain, a central coiled-coil domain, and a C-terminal region containing a Rho-binding domain (RBD), a zinc finger, and a pleckstrin homology (PH) domain, in addition to other motifs. CRIK, an effector of the small GTPase Rho, plays an important function during cytokinesis and affects its contractile process. CRIK-deficient mice show severe ataxia and epilepsy as a result of abnormal cytokinesis and massive apoptosis in neuronal precursors. A Down syndrome
Probab=97.50 E-value=0.0069 Score=38.32 Aligned_cols=136 Identities=15% Similarity=0.174 Sum_probs=68.9
Q ss_pred EECCCCCEEEEEEEEEC-CC-CEEEEEECCC--CCHHH---HHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 00466812001799943-99-5899982166--99889---999999999985326775551001026778752245155
Q gi|254780795|r 28 QPIIHGVENSNFVIQTS-KG-TFILTIYEKR--MNEKD---LPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~--~~~~~---l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 7 ~~LG~G~fG~V~~a~~~~tg~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~~~-----hp~Iv~l~~---~f~~~~~~yi 78 (330)
T cd05601 7 SVIGRGHFGEVQVVREKATGDIYAMKVMKKSVLLAQETVSFFEEERDIMAIAN-----SPWIPQLQY---AFQDKDNLYL 78 (330)
T ss_pred EEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHCC-----CCCCCEEEE---EEEECCEEEE
T ss_conf 68421758299999988999899999982688679899999999999998679-----998894999---9998999999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 79 vmEy~~gGdL~--------------~~l~~~~~~l--------~e~~~~------------~~~~qi~~al~yLH----- 119 (330)
T cd05601 79 VMEYHPGGDLL--------------SLLNRYEDQF--------DESMAQ------------FYLAELVLAIHSLH----- 119 (330)
T ss_pred EEECCCCCCHH--------------HHHHHCCCCC--------CHHHHH------------HHHHHHHHHHHHHH-----
T ss_conf 99837997489--------------9998618999--------999999------------99999999999997-----
Q ss_pred CCCCCEEECCCCCCCEEECC-CCCEEEECCCCCC
Q ss_conf 07774440223464225627-9604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~ 213 (316)
T Consensus 120 --~~gIiHRDiKPeNILld~~g~iK-L~DFGla~ 150 (330)
T cd05601 120 --QMGYVHRDIKPENILIDRTGHIK-LADFGSAA 150 (330)
T ss_pred --HCCEEECCCCCCCEEECCCCCEE-EEECCCEE
T ss_conf --48688454650003465899889-80265547