HHsearch alignment for GI: 254780795 and conserved domain: cd05605
>cd05605 STKc_GRK4_like STKc_GRK4_like: Serine/Threonine Kinases (STKs), G protein-coupled Receptor Kinase (GRK) subfamily, GRK4-like group, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The GRK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. GRKs phosphorylate and regulate G protein-coupled receptors (GPCRs), the largest superfamily of cell surface receptors which regulate some part of nearly all physiological functions. Phosphorylated GPCRs bind to arrestins, which prevents further G protein signaling despite the presence of activating ligand. There are seven types of GRKs, named GRK1 to GRK7. Members of the GRK4-like group include GRK4, GRK5, GRK6, and similar GRKs. GRKs in this group contain an N-terminal RGS homology (
Probab=97.39 E-value=0.0041 Score=39.74 Aligned_cols=138 Identities=17% Similarity=0.203 Sum_probs=71.5
Q ss_pred EECCCCCEEEEEEEEE-CCC-CEEEEEECCC-CCHH----HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 0046681200179994-399-5899982166-9988----9999999999985326775551001026778752245155
Q gi|254780795|r 28 QPIIHGVENSNFVIQT-SKG-TFILTIYEKR-MNEK----DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~-~~~~----~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 6 ~~lG~G~fg~V~~~~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~l~h-----p~Iv~l~---~~~~~~~~~~l 77 (285)
T cd05605 6 RVLGKGGFGEVCACQVRATGKMYACKKLEKKRIKKRKGEAMALNEKQILEKINS-----PFVVSLA---YAYETKDALCL 77 (285)
T ss_pred EEECCCCCEEEEEEEECCCCCEEEEEEEEHHHHCCHHHHHHHHHHHHHHHHCCC-----CCCCEEE---EEEEECCEEEE
T ss_conf 996138082999999999998999999837882005789999999999987799-----9899398---99997998999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 78 vmE~~~gGdL~----~~i~~~~---------~~~l~--------e~~~------------~~~~~qil~al~ylH~---- 120 (285)
T cd05605 78 VLTLMNGGDLK----FHIYNMG---------NPGFE--------EERA------------VFYAAEITCGLEHLHR---- 120 (285)
T ss_pred EEEECCCCCHH----HHHHHHC---------CCCCC--------HHHH------------HHHHHHHHHHHHHHHH----
T ss_conf 99964798489----9999727---------89999--------9999------------9999999999999987----
Q ss_pred CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 077744402234642256279604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 121 ---~~IiHRDlKPeNiLl~~~g~vKl~DFGla~ 150 (285)
T cd05605 121 ---ERIVYRDLKPENILLDDYGHVRISDLGLAV 150 (285)
T ss_pred ---CCEEECCCCCCCCCCCCCCCEEEEECCCEE
T ss_conf ---892655257321012268948981457127