HHsearch alignment for GI: 254780795 and conserved domain: cd05614

>cd05614 STKc_MSK2_N STKc_MSK2_N: Serine/Threonine Kinases (STKs), Mitogen and stress-activated kinase (MSK) subfamily, MSK2, N-terminal catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The MSK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MSKs contain an N-terminal kinase domain (NTD) from the AGC family and a C-terminal kinase domain (CTD) from the CAMK family, similar to 90 kDa ribosomal protein S6 kinases (RSKs). MSKs are activated by two major signaling cascades, the Ras-MAPK and p38 stress kinase pathways, which trigger phosphorylation in the activation loop (A-loop) of the CTD of MSK. The active CTD phosphorylates the hydrophobic motif (HM) of NTD, which facilitates the phosphorylation of the A-loop and activates the
Probab=97.55  E-value=0.00082  Score=44.28  Aligned_cols=136  Identities=18%  Similarity=0.274  Sum_probs=71.8

Q ss_pred             EECCCCCEEEEEEEEEC----CC-CEEEEEECCCC---CH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCC
Q ss_conf             00466812001799943----99-58999821669---98---8999999999998532677555100102677875224
Q gi|254780795|r   28 QPIIHGVENSNFVIQTS----KG-TFILTIYEKRM---NE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCK   96 (316)
Q Consensus        28 ~~i~~G~~Ntny~v~t~----~~-~yiLri~e~~~---~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~   96 (316)
T Consensus         6 k~LG~G~fG~Vylv~~~~~~~tg~~~AiK~i~k~~~~~~~~~~~~~~~E~~il~~~~~~----p~iv~l~---~~f~~~~   78 (332)
T cd05614           6 KVLGTGAYGKVFLVRKVTGHDTGKLYAMKVLQKAALVQKAKTVEHTRTERNVLEHVRQS----PFLVTLH---YAFQTEA   78 (332)
T ss_pred             EEEECCCCEEEEEEEECCCCCCCCEEEEEEEEHHHHCCCHHHHHHHHHHHHHHHHCCCC----CCEEEEE---EEEEECC
T ss_conf             79513888089999985307889589999981788422178999999999999962689----9778999---9998799


Q ss_pred             CCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHH
Q ss_conf             51557864788707689989999999986436753068754332311245645766752001552278899999998887
Q gi|254780795|r   97 KPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKE  176 (316)
Q Consensus        97 k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~  176 (316)
T Consensus        79 ~~ylVmEy~~gG~L~--------------~~l~~~-~~l~--------e~~~~------------~~~~qi~~aL~yLH~  123 (332)
T cd05614          79 KLHLILDYVSGGEMF--------------THLYQR-DNFS--------EDEVR------------FYSGEIILALEHLHK  123 (332)
T ss_pred             EEEEEEECCCCCCHH--------------HHHHHC-CCCC--------HHHHH------------HHHHHHHHHHHHHHH
T ss_conf             899999677999899--------------999864-9999--------99999------------999999999999987


Q ss_pred             HHHHCCCCCEEECCCCCCCEEECCC-CCEEEECCCCCC
Q ss_conf             6521077744402234642256279-604873162135
Q gi|254780795|r  177 SWPKNLPTGIIHADLFPDNVLFYNN-KIMGLIDFYFSC  213 (316)
Q Consensus       177 ~~~~~Lp~g~IHgDl~~~NiL~~~~-~i~giIDF~~~~  213 (316)
T Consensus       124 -------~gIiHRDlKPeNILl~~~g~ik-L~DFGlak  153 (332)
T cd05614         124 -------LGIVYRDIKLENILLDSEGHVV-LTDFGLSK  153 (332)
T ss_pred             -------CCCEECCCCHHHEEECCCCCEE-EECCHHHH
T ss_conf             -------8865256766770035899889-60240136