HHsearch alignment for GI: 254780795 and conserved domain: cd05616
>cd05616 STKc_cPKC_beta STKc_cPKC_beta: Serine/Threonine Kinases (STKs), Classical Protein Kinase C (cPKC) subfamily, beta isoforms, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The cPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. PKCs undergo three phosphorylations in order to take mature forms. In addition, cPKCs depend on calcium, DAG (1,2-diacylglycerol), and in most cases, phosphatidylserine (PS) for activation. There are four cPKC isoforms, named alpha, betaI, betaII, and gamma. The PKC beta isoforms (I and II), generated by alternative splicin
Probab=96.99 E-value=0.0084 Score=37.74 Aligned_cols=136 Identities=19% Similarity=0.248 Sum_probs=68.6
Q ss_pred EECCCCCEEEEEEEEECC-C-CEEEEEECCC--CCHHHHH---HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 004668120017999439-9-5899982166--9988999---9999999985326775551001026778752245155
Q gi|254780795|r 28 QPIIHGVENSNFVIQTSK-G-TFILTIYEKR--MNEKDLP---VFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~t~~-~-~yiLri~e~~--~~~~~l~---~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 6 k~LG~G~fG~V~la~~~~t~~~~AiK~i~k~~~~~~~~~~~~~~E~~il~~~~~~----p~Iv~l~~---~f~~~~~lyl 78 (323)
T cd05616 6 MVLGKGSFGKVMLAERKGTDELYAIKILKKDVVIQDDDVECTMVEKRVLALSGKP----PFLTQLHS---CFQTMDRLYF 78 (323)
T ss_pred EEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCCHHHHHHHHHHHHHHHHHCCC----CEEEEEEE---EEEECCEEEE
T ss_conf 7952276809999999999989999998278843847899999999999971799----92859999---9998999999
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 79 VmEy~~gGdL~--------------~~l~~~-~~l~--------e~~~~------------~~~~qi~~aL~yLH~---- 119 (323)
T cd05616 79 VMEYVNGGDLM--------------YQIQQV-GRFK--------EPHAV------------FYAAEIAIGLFFLHS---- 119 (323)
T ss_pred EEECCCCCCHH--------------HHHHHC-CCCC--------HHHHH------------HHHHHHHHHHHHHHH----
T ss_conf 99588998089--------------999981-9999--------89999------------999999999999987----
Q ss_pred CCCCCEEECCCCCCCEEECCC-CCEEEECCCCCC
Q ss_conf 077744402234642256279-604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYNN-KIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~~-~i~giIDF~~~~ 213 (316)
T Consensus 120 ---~~IiHRDLKPeNILl~~~g~iK-L~DFGlak 149 (323)
T cd05616 120 ---KGIIYRDLKLDNVMLDSEGHIK-IADFGMCK 149 (323)
T ss_pred ---CCCCCCCCCCCCEEECCCCCEE-EEEHHHHH
T ss_conf ---7975025477661476899778-85321544