HHsearch alignment for GI: 254780795 and conserved domain: cd05620
>cd05620 STKc_nPKC_delta STKc_nPKC_delta: Serine/Threonine Kinases (STKs), Novel Protein Kinase C (nPKC), delta isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The nPKC subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PKCs are classified into three groups (classical, atypical, and novel) depending on their mode of activation and the structural characteristics of their regulatory domain. nPKCs are calcium-independent, but require DAG (1,2-diacylglycerol) and phosphatidylserine (PS) for activity. There are four nPKC isoforms, delta, epsilon, eta, and theta. PKC-delta plays a role in cell cycle regulation and programmed cell death in many cell types. It slows down cell proliferation, inducing cell cycle arrest and enhanc
Probab=96.83 E-value=0.02 Score=35.34 Aligned_cols=133 Identities=21% Similarity=0.218 Sum_probs=65.4
Q ss_pred CCCCEEEEEEEEEC-CCC-EEEEEECCCC--CHHHHH---HHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEE
Q ss_conf 66812001799943-995-8999821669--988999---9999999985326775551001026778752245155786
Q gi|254780795|r 31 IHGVENSNFVIQTS-KGT-FILTIYEKRM--NEKDLP---VFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFS 103 (316)
Q Consensus 31 ~~G~~Ntny~v~t~-~~~-yiLri~e~~~--~~~~l~---~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~ 103 (316)
T Consensus 4 G~G~fG~V~la~~~~tg~~~AiK~i~k~~~~~~~~~~~~~~e~~il~~~----~~hp~Iv~l~~---~f~~~~~lylvmE 76 (316)
T cd05620 4 GKGSFGKVLLAELKGKGEYFAVKALKKDVVLIDDDVECTMVEKRVLALA----WENPFLTHLYC---TFQTKEHLFFVME 76 (316)
T ss_pred EECCCEEEEEEEECCCCCEEEEEEECHHHCCCCHHHHHHHHHHHHHHHH----CCCCCEEEEEE---EEEECCEEEEEEE
T ss_conf 5287949999999999989999998366624605799999999999985----79996826999---9998999999997
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCC
Q ss_conf 47887076899899999999864367530687543323112456457667520015522788999999988876521077
Q gi|254780795|r 104 FIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKNLP 183 (316)
Q Consensus 104 ~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Lp 183 (316)
T Consensus 77 y~~gGdL~--------------~~l~~~--~-------~~~e~~~~------------~~~~qi~~aL~yLH~------- 114 (316)
T cd05620 77 FLNGGDLM--------------FHIQDK--G-------RFDLYRAT------------FYAAEIVCGLQFLHS------- 114 (316)
T ss_pred CCCCCCHH--------------HHHHHC--C-------CCCHHHHH------------HHHHHHHHHHHHHHH-------
T ss_conf 67998887--------------878744--9-------99999999------------999999999999997-------
Q ss_pred CCEEECCCCCCCEEECCC-CCEEEECCCCCC
Q ss_conf 744402234642256279-604873162135
Q gi|254780795|r 184 TGIIHADLFPDNVLFYNN-KIMGLIDFYFSC 213 (316)
Q Consensus 184 ~g~IHgDl~~~NiL~~~~-~i~giIDF~~~~ 213 (316)
T Consensus 115 ~~IiHRDlKPeNILl~~~g~iK-L~DFGlak 144 (316)
T cd05620 115 KGIIYRDLKLDNVMLDRDGHIK-IADFGMCK 144 (316)
T ss_pred CCCEECCCCCCCCCCCCCCCEE-EEECCEEH
T ss_conf 8905230376555505899789-83214000