HHsearch alignment for GI: 254780795 and conserved domain: cd05621
>cd05621 STKc_ROCK2 STKc_ROCK2: Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain
Probab=97.47 E-value=0.0017 Score=42.23 Aligned_cols=142 Identities=14% Similarity=0.146 Sum_probs=76.2
Q ss_pred CCCCEEEEEECCCCCEEEEEEEEEC-CC-CEEEEEECCC--CC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf 9986053100466812001799943-99-5899982166--99---8899999999999853267755510010267787
Q gi|254780795|r 20 AIGQLNSVQPIIHGVENSNFVIQTS-KG-TFILTIYEKR--MN---EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYG 92 (316)
Q Consensus 20 ~lg~~~~~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~--~~---~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~ 92 (316)
T Consensus 41 ~~dDFeiik~IG~GsFG~V~lv~~k~tg~~yAiK~i~K~~~~~~~~~~~~~~E~~il~~~~h-----p~IV~l~~---~F 112 (370)
T cd05621 41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-----PWVVQLFC---AF 112 (370)
T ss_pred CHHHCEEEEEEEECCCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCEEE---EE
T ss_conf 75400586688507684899999989998999999988996436789999999999985799-----98891899---99
Q ss_pred HHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf 52245155786478870768998999999998643675306875433231124564576675200155227889999999
Q gi|254780795|r 93 FLCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFC 172 (316)
Q Consensus 93 ~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~ 172 (316)
T Consensus 113 qd~~~lylVmEy~~GGdL~-----------~ll---~~--~~~~--------E~~a------------~~y~~qi~~AL~ 156 (370)
T cd05621 113 QDDKYLYMVMEYMPGGDLV-----------NLM---SN--YDVP--------EKWA------------KFYTAEVVLALD 156 (370)
T ss_pred EECCEEEEEEECCCCCCHH-----------HHH---HC--CCCC--------HHHH------------HHHHHHHHHHHH
T ss_conf 8499899998589997499-----------998---81--8989--------9999------------999999999999
Q ss_pred HHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf 8887652107774440223464225627960487316213
Q gi|254780795|r 173 FLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFS 212 (316)
Q Consensus 173 ~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~ 212 (316)
T Consensus 157 yLH~-------~~IiHRDLKPeNILld~~g~iKL~DFGla 189 (370)
T cd05621 157 AIHS-------MGLIHRDVKPDNMLLDKHGHLKLADFGTC 189 (370)
T ss_pred HHHH-------CCEEECCCCCCCCCCCCCCCEEECCCCEE
T ss_conf 9853-------86785666732212258887353245215