HHsearch alignment for GI: 254780795 and conserved domain: cd05621

>cd05621 STKc_ROCK2 STKc_ROCK2: Serine/Threonine Kinases (STKs), ROCK subfamily, ROCK2 (or ROK-alpha) isoform, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The ROCK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. ROCK contains an N-terminal extension, a catalytic kinase domain, and a C-terminal extension, which contains a coiled-coil region encompassing a Rho-binding domain (RBD) and a pleckstrin homology (PH) domain. ROCK is auto-inhibited by the RBD and PH domain interacting with the catalytic domain, and is activated via interaction with Rho GTPases. ROCK2 was the first identified target of activated RhoA, and was found to play a role in stress fiber and focal adhesion formation. It is prominently expressed in the brain
Probab=97.47  E-value=0.0017  Score=42.23  Aligned_cols=142  Identities=14%  Similarity=0.146  Sum_probs=76.2

Q ss_pred             CCCCEEEEEECCCCCEEEEEEEEEC-CC-CEEEEEECCC--CC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH
Q ss_conf             9986053100466812001799943-99-5899982166--99---8899999999999853267755510010267787
Q gi|254780795|r   20 AIGQLNSVQPIIHGVENSNFVIQTS-KG-TFILTIYEKR--MN---EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYG   92 (316)
Q Consensus        20 ~lg~~~~~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~--~~---~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~   92 (316)
T Consensus        41 ~~dDFeiik~IG~GsFG~V~lv~~k~tg~~yAiK~i~K~~~~~~~~~~~~~~E~~il~~~~h-----p~IV~l~~---~F  112 (370)
T cd05621          41 KAEDYDVVKVIGRGAFGEVQLVRHKSSQKVYAMKLLSKFEMIKRSDSAFFWEERDIMAFANS-----PWVVQLFC---AF  112 (370)
T ss_pred             CHHHCEEEEEEEECCCCEEEEEEECCCCCEEEEEEEEHHHHHHHHHHHHHHHHHHHHHHCCC-----CCCCCEEE---EE
T ss_conf             75400586688507684899999989998999999988996436789999999999985799-----98891899---99


Q ss_pred             HHCCCCEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHH
Q ss_conf             52245155786478870768998999999998643675306875433231124564576675200155227889999999
Q gi|254780795|r   93 FLCKKPANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFC  172 (316)
Q Consensus        93 ~~~~k~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~  172 (316)
T Consensus       113 qd~~~lylVmEy~~GGdL~-----------~ll---~~--~~~~--------E~~a------------~~y~~qi~~AL~  156 (370)
T cd05621         113 QDDKYLYMVMEYMPGGDLV-----------NLM---SN--YDVP--------EKWA------------KFYTAEVVLALD  156 (370)
T ss_pred             EECCEEEEEEECCCCCCHH-----------HHH---HC--CCCC--------HHHH------------HHHHHHHHHHHH
T ss_conf             8499899998589997499-----------998---81--8989--------9999------------999999999999


Q ss_pred             HHHHHHHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCC
Q ss_conf             8887652107774440223464225627960487316213
Q gi|254780795|r  173 FLKESWPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFS  212 (316)
Q Consensus       173 ~~~~~~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~  212 (316)
T Consensus       157 yLH~-------~~IiHRDLKPeNILld~~g~iKL~DFGla  189 (370)
T cd05621         157 AIHS-------MGLIHRDVKPDNMLLDKHGHLKLADFGTC  189 (370)
T ss_pred             HHHH-------CCEEECCCCCCCCCCCCCCCEEECCCCEE
T ss_conf             9853-------86785666732212258887353245215