HHsearch alignment for GI: 254780795 and conserved domain: cd06621

>cd06621 PKc_MAPKK_Pek1_like Protein kinases (PKs), MAP kinase kinase(MAPKK) subfamily, fungal Pek1-like proteins, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include the MAPKKs Pek1/Skh1 from Schizosaccharomyces pombe and MKK2 from Saccharo
Probab=97.77  E-value=0.0012  Score=43.30  Aligned_cols=146  Identities=15%  Similarity=0.221  Sum_probs=77.4

Q ss_pred             EEEEEECCCCCEEEEEEEEEC-CCC-EEEEEECCCCCHH---HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCC
Q ss_conf             053100466812001799943-995-8999821669988---99999999999853267755510010267787522451
Q gi|254780795|r   24 LNSVQPIIHGVENSNFVIQTS-KGT-FILTIYEKRMNEK---DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKP   98 (316)
Q Consensus        24 ~~~~~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~~~~~---~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~   98 (316)
T Consensus         3 y~~l~~lG~G~fg~V~~a~~~~~~~~~AiK~i~~~~~~~~~~~~~~Ei~il~~l~H-----pnIv~~~~-~~~~~~~~~~   76 (287)
T cd06621           3 IVELSRLGEGAGGSVTKCRLKNTGMIFALKTITTDPNPDLQKQILRELEINKSCKS-----PYIVKYYG-AFLDESSSSI   76 (287)
T ss_pred             CEEEEEEECCCCEEEEEEEECCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC-----CCCCCEEE-EEECCCCCEE
T ss_conf             68985730488909999998999919999998303595899999999999985799-----99990978-9970889989


Q ss_pred             EEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
Q ss_conf             55786478870768998999999998643675306875433231124564576675200155227889999999888765
Q gi|254780795|r   99 ANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESW  178 (316)
Q Consensus        99 ~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~  178 (316)
T Consensus        77 ~ivmEy~~gg~L~~-----------~~~~~~~~~~~~~--------e~----~~--------~~i~~qil~gL~ylH~--  123 (287)
T cd06621          77 GIAMEYCEGGSLDS-----------IYKKVKKRGGRIG--------EK----VL--------GKIAESVLKGLSYLHS--  123 (287)
T ss_pred             EEEEECCCCCCHHH-----------HHHHHHHCCCCCC--------HH----HH--------HHHHHHHHHHHHHHHH--
T ss_conf             99995469993999-----------9999987179999--------99----99--------9999999999999997--


Q ss_pred             HHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf             21077744402234642256279604873162135
Q gi|254780795|r  179 PKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC  213 (316)
Q Consensus       179 ~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~  213 (316)
T Consensus       124 -----~~iiHRDlKp~NILl~~~g~vKl~DFG~s~  153 (287)
T cd06621         124 -----RKIIHRDIKPSNILLTRKGQVKLCDFGVSG  153 (287)
T ss_pred             -----CCCEECCCCHHHEEECCCCCEEEEECCCCC
T ss_conf             -----990422167455006799989999785575