HHsearch alignment for GI: 254780795 and conserved domain: cd06623

>cd06623 PKc_MAPKK_plant_like Protein kinases (PKs), MAP kinase kinase (MAPKK) subfamily, catalytic (c) domain. PKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine or tyrosine residues on protein substrates. The MAPKK subfamily is part of a larger superfamily that includes the catalytic domains of other protein serine/threonine kinases, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. The mitogen-activated protein (MAP) kinase signaling pathways are important mediators of cellular responses to extracellular signals. The pathways involve a triple kinase core cascade comprising of the MAP kinase (MAPK), which is phosphorylated and activated by a MAPK kinase (MAPKK or MKK), which itself is phosphorylated and activated by a MAPK kinase kinase (MAPKKK or MKKK). Members of this group include MAPKKs from plants, kinetoplastids, alveolates, and mycetozoa. The MAPKK, LmxPK4, from Leishmania m
Probab=97.37  E-value=0.011  Score=37.01  Aligned_cols=139  Identities=17%  Similarity=0.245  Sum_probs=74.5

Q ss_pred             EEECCCCCEEEEEEEEEC-CC-CEEEEEECCCCCH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEE
Q ss_conf             100466812001799943-99-5899982166998---899999999999853267755510010267787522451557
Q gi|254780795|r   27 VQPIIHGVENSNFVIQTS-KG-TFILTIYEKRMNE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANI  101 (316)
Q Consensus        27 ~~~i~~G~~Ntny~v~t~-~~-~yiLri~e~~~~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L  101 (316)
T Consensus         6 ~~~iG~G~fg~Vy~~~~~~~~~~vAvK~i~~~~~~~~~~~~~~E~~il~~l~HpnI-----V~~~~---~~~~~~~~~lv   77 (264)
T cd06623           6 VKVLGQGSSGVVYKVRHKPTGKIYALKKIHVDGDEEFRKQLLRELKTLRSCESPYV-----VKCYG---AFYKEGEISIV   77 (264)
T ss_pred             EEEEECCCCEEEEEEEECCCCCEEEEEEECCCCCHHHHHHHHHHHHHHHHCCCCCC-----CEEEE---EEEECCEEEEE
T ss_conf             58983178939999999899989999998214697899999999999986799988-----82999---99889999999


Q ss_pred             EECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHC
Q ss_conf             86478870768998999999998643675306875433231124564576675200155227889999999888765210
Q gi|254780795|r  102 FSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPKN  181 (316)
Q Consensus       102 ~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~  181 (316)
T Consensus        78 mEy~~~G~L~~-----------~i---~~---~------~~~~e~~~~------------~~~~qi~~gl~yLH~-----  117 (264)
T cd06623          78 LEYMDGGSLAD-----------LL---KK---V------GKIPEPVLA------------YIARQILKGLDYLHT-----  117 (264)
T ss_pred             EECCCCCCHHH-----------HH---HH---C------CCCCHHHHH------------HHHHHHHHHHHHHHH-----
T ss_conf             97899984999-----------99---73---4------898999999------------999999999999987-----


Q ss_pred             CCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf             777444022346422562796048731621356
Q gi|254780795|r  182 LPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN  214 (316)
Q Consensus       182 Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~  214 (316)
T Consensus       118 -~~~IiHRDlKp~NILl~~~~~iKl~DFG~a~~  149 (264)
T cd06623         118 -KRHIIHRDIKPSNLLINSKGEVKIADFGISKV  149 (264)
T ss_pred             -CCCEECCCCCHHHEEECCCCCEEEECCCCCEE
T ss_conf             -08988044788996988999999921878858