HHsearch alignment for GI: 254780795 and conserved domain: cd06656

>cd06656 STKc_PAK3 Serine/threonine kinases (STKs), p21-activated kinase (PAK) 3, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PAK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PAKs are Rho family GTPase-regulated kinases that serve as important mediators in the function of Cdc42 (cell division cycle 42) and Rac. PAKs from higher eukaryotes are classified into two groups (I and II), according to their biochemical and structural features. PAK3 belongs to group I. Group I PAKs contain a PBD (p21-binding domain) overlapping with an AID (autoinhibitory domain), a C-terminal catalytic domain, SH3 binding sites and a non-classical SH3 binding site for PIX (PAK-interacting exchange factor). PAK3 is highly expressed in the b
Probab=97.96  E-value=0.00067  Score=44.87  Aligned_cols=138  Identities=15%  Similarity=0.232  Sum_probs=76.4

Q ss_pred             EEEEEECCCCCEEEEEEEEE-CCC-CEEEEEECC--CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf             05310046681200179994-399-589998216--69988999999999998532677555100102677875224515
Q gi|254780795|r   24 LNSVQPIIHGVENSNFVIQT-SKG-TFILTIYEK--RMNEKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA   99 (316)
Q Consensus        24 ~~~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~--~~~~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~   99 (316)
T Consensus        21 Y~~~~~iG~G~fg~Vy~a~~~~tg~~vAiK~i~~~~~~~~~~~~~Ei~~l~~l~H-----pnIv~~~~---~~~~~~~~~   92 (297)
T cd06656          21 YTRFEKIGQGASGTVYTAIDIATGQEVAIKQMNLQQQPKKELIINEILVMRENKN-----PNIVNYLD---SYLVGDELW   92 (297)
T ss_pred             EEEEEEECCCCCEEEEEEEECCCCCEEEEEEEEHHHCCHHHHHHHHHHHHHHCCC-----CCCCEEEE---EEEECCEEE
T ss_conf             1887897048581999999889998999999873327628999999999986799-----99890999---999899999


Q ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r  100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP  179 (316)
Q Consensus       100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  179 (316)
T Consensus        93 iVmEy~~gg~L~~-----------~l~~-----~~l~--------e~~~------------~~i~~qil~aL~ylH~---  133 (297)
T cd06656          93 VVMEYLAGGSLTD-----------VVTE-----TCMD--------EGQI------------AAVCRECLQALDFLHS---  133 (297)
T ss_pred             EEEECCCCCCHHH-----------HHHC-----CCCC--------HHHH------------HHHHHHHHHHHHHHHH---
T ss_conf             9995589992899-----------8751-----6999--------9999------------9999999999999997---


Q ss_pred             HCCCCCEEECCCCCCCEEECCC-CCEEEECCCCCC
Q ss_conf             1077744402234642256279-604873162135
Q gi|254780795|r  180 KNLPTGIIHADLFPDNVLFYNN-KIMGLIDFYFSC  213 (316)
Q Consensus       180 ~~Lp~g~IHgDl~~~NiL~~~~-~i~giIDF~~~~  213 (316)
T Consensus       134 ----~~IiHRDlKP~NILl~~~g~vK-L~DFGla~  163 (297)
T cd06656         134 ----NQVIHRDIKSDNILLGMDGSVK-LTDFGFCA  163 (297)
T ss_pred             ----CCCCCCCCCHHHEEECCCCCEE-EECCCCCE
T ss_conf             ----8955041881646898999999-98588885