>cd07840 STKc_CDK9_like The catalytic domain of Cyclin-Dependent protein Kinase 9-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), Cyclin-Dependent protein Kinase 9 (CDK9)-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK9-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. This subfamily is composed of CDK9 and CDK12 from higher eukaryotes, yeast BUR1, C-type plant CDKs (CdkC), and similar proteins. CDK9, BUR1, and CdkC are functionally equivalent. They act as a kinase for the C-terminal domain of RN

Probab=97.60 E-value=0.0016 Score=42.42 Aligned_cols=139 Identities=17% Similarity=0.258 Sum_probs=70.2 Q ss_pred EEECCCCCEEEEEEEEE-CCCC-EEEEEECCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEE Q ss_conf 10046681200179994-3995-8999821669988----9999999999985326775551001026778752245155 Q gi|254780795|r 27 VQPIIHGVENSNFVIQT-SKGT-FILTIYEKRMNEK----DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPAN 100 (316) Q Consensus 27 ~~~i~~G~~Ntny~v~t-~~~~-yiLri~e~~~~~~----~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~ 100 (316) T Consensus 4 ~~~iG~G~fg~V~~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~h-----pnIi~~~~-~~~~~~~~~~~i 77 (287) T cd07840 4 IAQIGEGTYGQVYKARNKKTGELVALKKIRMENEKEGFPITAIREIKLLQKLRH-----PNIVRLKE-IVTSKGKGSIYM 77 (287) T ss_pred EEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHCCC-----CCCCCEEE-EEEECCCCEEEE T ss_conf 899732869299999988999899999983001540668999999999997799-----89763678-999669987999 Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521 Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316) Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316) T Consensus 78 v~E~~~~d-L-----------~~~l---~~--~~~~------~~~~~~~------------~~~~qll~al~ylH~---- 118 (287) T cd07840 78 VFEYMDHD-L-----------TGLL---DS--PEVK------FTESQIK------------CYMKQLLEGLQYLHS---- 118 (287) T ss_pred EEECCCCC-H-----------HHHH---HH--CCCC------CCHHHHH------------HHHHHHHHHHHHHHH---- T ss_conf 99268987-8-----------9999---82--6899------8999999------------999999999999987---- Q ss_pred CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC Q ss_conf 077744402234642256279604873162135 Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316) Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316) T Consensus 119 ---~~iiHRDlKp~NILl~~~~~vKl~DFG~a~ 148 (287) T cd07840 119 ---NGILHRDIKGSNILINNDGVLKIADFGLAR 148 (287) T ss_pred ---CCEEEEECCHHHEEECCCCCEEEEECCCCE T ss_conf ---997753367788478899998983679873

HHsearch alignment for GI: 254780795 and conserved domain: cd07840