>cd07843 STKc_CDC2L1 The catalytic domain of the Serine/Threonine Kinase, Cell Division Cycle 2-like 1 subfamily. Serine/Threonine Kinases (STKs), Cell Division Cycle 2-like 1 (CDC2L1) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDC2L1 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDC2L1, also called PITSLRE, exists in different isoforms which are named using the alias CDK11(p). The CDC2L1 gene produces two protein products, CDK11(p110) and CDK11(p58). CDC2L1 is also represented by the caspase-processed CDK11(p46). CD

Probab=97.77 E-value=0.00076 Score=44.50 Aligned_cols=139 Identities=16% Similarity=0.206 Sum_probs=71.7 Q ss_pred EEEECCCCCEEEEEEEEE-CCC-CEEEEEECCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE Q ss_conf 310046681200179994-399-58999821669988----999999999998532677555100102677875224515 Q gi|254780795|r 26 SVQPIIHGVENSNFVIQT-SKG-TFILTIYEKRMNEK----DLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316) Q Consensus 26 ~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~~~~~----~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316) T Consensus 9 il~~iG~G~fg~V~~~~~~~t~~~vAiK~i~~~~~~~~~~~~~~rEi~~l~~l~h-----pnIv~~~~-~~~~~~~~~~~ 82 (293) T cd07843 9 KLNRIEEGTYGVVYRARDKKTGEIVALKKLKMEKEKEGFPITSLREINILLKLQH-----PNIVTVKE-VVVGSNLDKIY 82 (293) T ss_pred EEEEEECCCCCEEEEEEECCCCCEEEEEEEECHHHHHHHHHHHHHHHHHHHHCCC-----CCEEEEEE-EEECCCCCEEE T ss_conf 2478313628099999988999899999980004220417889999999997689-----99415888-76058898799 Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652 Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316) Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316) T Consensus 83 lvmE~~~~dl------~~~---------~~~~~~~~~--------~~~i------------~~i~~qil~aL~yLH~--- 124 (293) T cd07843 83 MVMEYVEHDL------KSL---------METMKQPFL--------QSEV------------KTLMLQLLSGVAHLHD--- 124 (293) T ss_pred EEEECCCCCH------HHH---------HHHCCCCCC--------HHHH------------HHHHHHHHHHHHHHHH--- T ss_conf 9993788878------999---------997489999--------9999------------9999999999999998--- Q ss_pred HCCCCCEEECCCCCCCEEECCC-CCEEEECCCCCC Q ss_conf 1077744402234642256279-604873162135 Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYNN-KIMGLIDFYFSC 213 (316) Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~~-~i~giIDF~~~~ 213 (316) T Consensus 125 ----~~IiHRDiKPeNILl~~~~~vK-i~DFG~a~ 154 (293) T cd07843 125 ----NWILHRDLKTSNLLLNNRGILK-ICDFGLAR 154 (293) T ss_pred ----CCEEEEECCHHHEEECCCCCEE-EECCCCHH T ss_conf ----8935725675665787899889-92247533

HHsearch alignment for GI: 254780795 and conserved domain: cd07843