HHsearch alignment for GI: 254780795 and conserved domain: cd07844

>cd07844 STKc_PCTAIRE_like The catalytic domain of PCTAIRE-like Serine/Threonine Kinases. Serine/Threonine Kinases (STKs), PCTAIRE-like subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PCTAIRE-like subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. Members of this subfamily share sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. The association of PCTAIRE-like proteins with cyclins has not been widely studied, although PFTAIRE-1 has been shown to function as a CDK which is regulated by cyclin D3 as well as
Probab=97.69  E-value=0.0018  Score=42.10  Aligned_cols=138  Identities=14%  Similarity=0.171  Sum_probs=73.7

Q ss_pred             EEEEECCCCCEEEEEEEEEC-CCC-EEEEEECCCCC---HHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf             53100466812001799943-995-89998216699---88999999999998532677555100102677875224515
Q gi|254780795|r   25 NSVQPIIHGVENSNFVIQTS-KGT-FILTIYEKRMN---EKDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA   99 (316)
Q Consensus        25 ~~~~~i~~G~~Ntny~v~t~-~~~-yiLri~e~~~~---~~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~   99 (316)
T Consensus         8 ~~~~~lG~G~fg~V~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~rEi~il~~l~h~n-----Iv~l~~---~~~~~~~~~   79 (291)
T cd07844           8 KKLDKLGEGSYATVYKGRSKLTGQLVALKEIRLEHEEGAPFTAIREASLLKDLKHAN-----IVTLHD---IIHTKKTLT   79 (291)
T ss_pred             EEEEEEECCCCEEEEEEEECCCCCEEEEEEEECCCCCCCHHHHHHHHHHHHHCCCCC-----CCEEEE---EEEECCEEE
T ss_conf             887698228693999999889998999999870101222788999999998678989-----874988---884188689


Q ss_pred             EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf             57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r  100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP  179 (316)
Q Consensus       100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~  179 (316)
T Consensus        80 iv~Ey~~~~L------------~~~l~~-~--~~~l--------~~~~i------------~~~~~Qil~al~yLH~---  121 (291)
T cd07844          80 LVFEYLDTDL------------KQYMDD-C--GGGL--------SMHNV------------RLFLFQLLRGLAYCHQ---  121 (291)
T ss_pred             EEEEECCCCH------------HHHHHH-C--CCCC--------CHHHH------------HHHHHHHHHHHHHHHH---
T ss_conf             9998028988------------999997-6--8999--------99999------------9999999999999987---


Q ss_pred             HCCCCCEEECCCCCCCEEECC-CCCEEEECCCCCC
Q ss_conf             107774440223464225627-9604873162135
Q gi|254780795|r  180 KNLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSC  213 (316)
Q Consensus       180 ~~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~  213 (316)
T Consensus       122 ----~~iiHRDiKP~NILl~~~~~iK-l~DFG~s~  151 (291)
T cd07844         122 ----RRVLHRDLKPQNLLISERGELK-LADFGLAR  151 (291)
T ss_pred             ----CCEEECCCCHHHEEECCCCCEE-ECCCCCCH
T ss_conf             ----9946671767986888899788-64115331