HHsearch alignment for GI: 254780795 and conserved domain: cd07859
>cd07859 STKc_TDY_MAPK_plant The catalytic domain of the Serine/Threonine Kinases, TDY Mitogen-Activated Protein Kinases from Plants. Serine/Threonine Kinases (STKs), Plant TDY Mitogen-Activated Protein Kinase (MAPK) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The TDY MAPK subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. MAPKs are important mediators of cellular responses to extracellular signals. In plants, MAPKs are associated with physiological, developmental, hormonal, and stress responses. Some plants show numerous gene duplications of MAPKs. Arabidopsis thaliana harbors at least 20 MAPKs, named AtMPK1-20. Oryza sativa contains at least 17 MAPKs. There are two subtypes of plant MAPKs based on the conserved
Probab=96.99 E-value=0.018 Score=35.56 Aligned_cols=139 Identities=13% Similarity=0.185 Sum_probs=67.0
Q ss_pred EECCCCCEEEEEEEE-ECCCC-EEEEEECCC----CCHHHHHHHHHHHHHHHHCCCC-CCCCCCCCHHHHHHHHCCCCEE
Q ss_conf 004668120017999-43995-899982166----9988999999999998532677-5551001026778752245155
Q gi|254780795|r 28 QPIIHGVENSNFVIQ-TSKGT-FILTIYEKR----MNEKDLPVFIELLHYISRNKLP-CPIPIPRNDGKLYGFLCKKPAN 100 (316)
Q Consensus 28 ~~i~~G~~Ntny~v~-t~~~~-yiLri~e~~----~~~~~l~~~~~ll~~L~~~gip-vP~pi~~~~G~~~~~~~~k~~~ 100 (316)
T Consensus 6 ~~IG~G~fG~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~HpnIv~~~~~~~~~~~~~----~~~~yi 81 (338)
T cd07859 6 EVIGKGSYGVVCSAIDTHTGEKVAIKKINDVFEHVSDATRILREIKLLRLLRHPDIVEIKHIMLPPSRRE----FKDIYV 81 (338)
T ss_pred EEEECCCCEEEEEEEECCCCCEEEEEEECCHHCCHHHHHHHHHHHHHHHHCCCCCCCCEEEEEECCCCCC----CCEEEE
T ss_conf 5974272849999998899989999998812308578999999999998679959884889995178665----665899
Q ss_pred EEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
Q ss_conf 78647887076899899999999864367530687543323112456457667520015522788999999988876521
Q gi|254780795|r 101 IFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWPK 180 (316)
Q Consensus 101 L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~ 180 (316)
T Consensus 82 v~e~~~~~L---------~~---~i~----~~~~l~--------~~~~~------------~~~~Qil~aL~ylH~---- 121 (338)
T cd07859 82 VFELMESDL---------HQ---VIK----ANDDLT--------PEHHQ------------FFLYQLLRALKYIHT---- 121 (338)
T ss_pred EEEECCCCH---------HH---HHH----HCCCCC--------HHHHH------------HHHHHHHHHHHHHHH----
T ss_conf 997059847---------88---876----269999--------99999------------999999999999978----
Q ss_pred CCCCCEEECCCCCCCEEECCCCCEEEECCCCCC
Q ss_conf 077744402234642256279604873162135
Q gi|254780795|r 181 NLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSC 213 (316)
Q Consensus 181 ~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~ 213 (316)
T Consensus 122 ---~~IiHRDLKPeNIL~~~~~~vKl~DFGlar 151 (338)
T cd07859 122 ---ANVFHRDLKPKNILANADCKLKICDFGLAR 151 (338)
T ss_pred ---CCCEEECCCHHEEEECCCCCEEECCCCEEE
T ss_conf ---788430054310788689976521355135