HHsearch alignment for GI: 254780795 and conserved domain: cd07862
>cd07862 STKc_CDK6 The catalytic domain of the Serine/Threonine Kinase, Cyclin-Dependent protein Kinase 6. Serine/Threonine Kinases (STKs), Cyclin-dependent protein kinase 6 (CDK6) subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The CDK6 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. CDKs belong to a large family of STKs that are regulated by their cognate cyclins. Together, they are involved in the control of cell-cycle progression, transcription, and neuronal function. CDK6 is regulated by D-type cyclins and INK4 inhibitors. It is active towards the retinoblastoma (pRb) protein, implicating it to function in regulating the early G1 phase of the cell cycle. It is expressed ubiquitously and is localized in the cyt
Probab=97.29 E-value=0.011 Score=37.10 Aligned_cols=143 Identities=19% Similarity=0.221 Sum_probs=73.3
Q ss_pred EEECCCCCEEEEEEEEE--CCCCE-EEEEECCCCCHH----HHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHH--HHCCC
Q ss_conf 10046681200179994--39958-999821669988----99999999999853267755510010267787--52245
Q gi|254780795|r 27 VQPIIHGVENSNFVIQT--SKGTF-ILTIYEKRMNEK----DLPVFIELLHYISRNKLPCPIPIPRNDGKLYG--FLCKK 97 (316)
Q Consensus 27 ~~~i~~G~~Ntny~v~t--~~~~y-iLri~e~~~~~~----~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~--~~~~k 97 (316)
T Consensus 6 ~~~iG~G~fg~V~~~~~~~~~~~~vAiK~i~~~~~~~~~~~~~~~Ei~il~~l~~--~~HpnIv~l~d~~~~~~~~~~~~ 83 (290)
T cd07862 6 VAEIGEGAYGKVFKARDLKNGGRFVALKRVRVQTGEEGMPLSTIREVAVLRHLET--FEHPNVVRLFDVCTVSRTDRETK 83 (290)
T ss_pred EEEEECCCCCEEEEEEEECCCCEEEEEEEECCCCCCHHHHHHHHHHHHHHHHHHH--CCCCCEEEEEEEEEECCCCCCCE
T ss_conf 1586414380999999989899899999984000330448999999999997615--68999888987885224578876
Q ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 15578647887076899899999999864367530687543323112456457667520015522788999999988876
Q gi|254780795|r 98 PANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKES 177 (316)
Q Consensus 98 ~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 177 (316)
T Consensus 84 ~~iv~E~~~~~L------------~~~l~~~~~--~~~--------~~~~----i--------~~i~~Qil~al~ylH~- 128 (290)
T cd07862 84 LTLVFEHVDQDL------------TTYLDKVPE--PGV--------PTET----I--------KDMMFQLLRGLDFLHS- 128 (290)
T ss_pred EEEEEECCCCCH------------HHHHHHCCC--CCC--------CHHH----H--------HHHHHHHHHHHHHHHH-
T ss_conf 999997799988------------999986667--898--------9999----9--------9999999999999998-
Q ss_pred HHHCCCCCEEECCCCCCCEEECC-CCCEEEECCCCCC
Q ss_conf 52107774440223464225627-9604873162135
Q gi|254780795|r 178 WPKNLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSC 213 (316)
Q Consensus 178 ~~~~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~ 213 (316)
T Consensus 129 ------~~IiHRDlKPeNILl~~~~~vK-l~DFGla~ 158 (290)
T cd07862 129 ------HRVVHRDLKPQNILVTSSGQIK-LADFGLAR 158 (290)
T ss_pred ------CCCEECCCCHHHEEECCCCCEE-ECCCCCCE
T ss_conf ------8934354645235898999979-73234305