HHsearch alignment for GI: 254780795 and conserved domain: cd07870
>cd07870 STKc_PFTAIRE2 The catalytic domain of the Serine/Threonine Kinase, PFTAIRE-2 kinase. Serine/Threonine Kinases (STKs), PFTAIRE-2 subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The PFTAIRE-2 subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. PFTAIRE-2 shares sequence similarity with Cyclin-Dependent Kinases (CDKs), which belong to a large family of STKs that are regulated by their cognate cyclins. Together, CDKs and cyclins are involved in the control of cell-cycle progression, transcription, and neuronal function. PFTAIRE-2 is also referred to as ALS2CR7 (amyotrophic lateral sclerosis 2 (juvenile) chromosome region candidate 7). It may be associated with amyotrophic lateral sclerosis 2 (ALS2), an autosomal re
Probab=97.47 E-value=0.008 Score=37.89 Aligned_cols=138 Identities=16% Similarity=0.224 Sum_probs=74.0
Q ss_pred EEEEECCCCCEEEEEEEEE-CCCC-EEEEEECCCCCH---HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCE
Q ss_conf 5310046681200179994-3995-899982166998---8999999999998532677555100102677875224515
Q gi|254780795|r 25 NSVQPIIHGVENSNFVIQT-SKGT-FILTIYEKRMNE---KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPA 99 (316)
Q Consensus 25 ~~~~~i~~G~~Ntny~v~t-~~~~-yiLri~e~~~~~---~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~ 99 (316)
T Consensus 8 ~~~~~lG~G~fg~V~~a~~~~tg~~vAiK~i~~~~~~~~~~~~~rEi~il~~l~H-----pnIv~l~~---~~~~~~~~~ 79 (291)
T cd07870 8 LNLEKLGEGSYATVYKGISRINGQLVALKVISMKTEEGVPFTAIREASLLKGLKH-----ANIVLLHD---IIHTKETLT 79 (291)
T ss_pred EEEEEEECCCCCEEEEEEECCCCCEEEEEEEEHHHCCCCHHHHHHHHHHHHHCCC-----CCEEEEEE---CCCCCCEEE
T ss_conf 7868931372809999998899979999998320012307899999999986799-----99877831---015786589
Q ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHH
Q ss_conf 57864788707689989999999986436753068754332311245645766752001552278899999998887652
Q gi|254780795|r 100 NIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKESWP 179 (316)
Q Consensus 100 ~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~ 179 (316)
T Consensus 80 lv~Ey~~~~l~------------~~~~~-~--~~~l~--------~~~i------------~~~~~Qil~aL~ylH~--- 121 (291)
T cd07870 80 FVFEYMHTDLA------------QYMIQ-H--PGGLH--------PYNV------------RLFMFQLLRGLAYIHG--- 121 (291)
T ss_pred EEEECCCCHHH------------HHHHH-C--CCCCC--------HHHH------------HHHHHHHHHHHHHHHH---
T ss_conf 99973572458------------99996-6--79999--------9999------------9999999999999987---
Q ss_pred HCCCCCEEECCCCCCCEEECC-CCCEEEECCCCCC
Q ss_conf 107774440223464225627-9604873162135
Q gi|254780795|r 180 KNLPTGIIHADLFPDNVLFYN-NKIMGLIDFYFSC 213 (316)
Q Consensus 180 ~~Lp~g~IHgDl~~~NiL~~~-~~i~giIDF~~~~ 213 (316)
T Consensus 122 ----~~IiHRDlKPeNILi~~~~~vK-l~DFGla~ 151 (291)
T cd07870 122 ----QHILHRDLKPQNLLISYLGELK-LADFGLAR 151 (291)
T ss_pred ----CCCEECCCCHHHEEECCCCCEE-EEEECCCC
T ss_conf ----8834144871325787899889-98752430