HHsearch alignment for GI: 254780795 and conserved domain: cd07880
>cd07880 STKc_p38gamma_MAPK12 The catalytic domain of the Serine/Threonine Kinase, p38gamma Mitogen-Activated Protein Kinase. Serine/Threonine Kinases (STKs), p38gamma subfamily, catalytic (c) domain. STKs catalyze the transfer of the gamma-phosphoryl group from ATP to serine/threonine residues on protein substrates. The p38gamma subfamily is part of a larger superfamily that includes the catalytic domains of other protein STKs, protein tyrosine kinases, RIO kinases, aminoglycoside phosphotransferase, choline kinase, and phosphoinositide 3-kinase. p38 kinases are mitogen-activated protein kinases (MAPKs), serving as important mediators of cellular responses to extracellular signals. They are activated by the MAPK kinases MKK3 and MKK6, which in turn are activated by upstream MAPK kinase kinases including TAK1, ASK1, and MLK3, in response to cellular stresses or inflammatory cytokines. Vertebrates contain four isoforms of p38, named alpha, beta, gamma, and delta. p38gamma, also called MA
Probab=97.30 E-value=0.005 Score=39.23 Aligned_cols=143 Identities=15% Similarity=0.220 Sum_probs=70.2
Q ss_pred EEEEECCCCCEEEEEEEEE-CCC-CEEEEEECCC-CCH---HHHHHHHHHHHHHHHCCCCCCCCCCC-CHHHHHHHHCCC
Q ss_conf 5310046681200179994-399-5899982166-998---89999999999985326775551001-026778752245
Q gi|254780795|r 25 NSVQPIIHGVENSNFVIQT-SKG-TFILTIYEKR-MNE---KDLPVFIELLHYISRNKLPCPIPIPR-NDGKLYGFLCKK 97 (316)
Q Consensus 25 ~~~~~i~~G~~Ntny~v~t-~~~-~yiLri~e~~-~~~---~~l~~~~~ll~~L~~~gipvP~pi~~-~~G~~~~~~~~k 97 (316)
T Consensus 18 ~i~~~IG~G~fG~V~~a~d~~t~~~vAiK~i~~~~~~~~~~~~~~rEi~il~~l~h~nIv--~l~~~f~~~~~~~~-~~~ 94 (343)
T cd07880 18 RDLKQVGSGAYGTVCSALDRRTGAKVAIKKLYRPFQSELFAKRAYRELRLLKHMKHENVI--GLLDVFTPDLSLDR-FHD 94 (343)
T ss_pred EEEEEEECCCCEEEEEEEECCCCCEEEEEEECHHHCCHHHHHHHHHHHHHHHHCCCCCCC--CEEEEEECCCCCCC-CCE
T ss_conf 885797216274999999889998999999873443869999999999999866898956--17789832775455-660
Q ss_pred CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH
Q ss_conf 15578647887076899899999999864367530687543323112456457667520015522788999999988876
Q gi|254780795|r 98 PANIFSFIKGSPLNHISDIHCEEIGSMLASMHQKTKNFHLYRKNTLSPLNLKFLWAKCFDKVDEDLKKEIDHEFCFLKES 177 (316)
Q Consensus 98 ~~~L~~~i~G~~~~~~~~~~~~~lG~~La~lH~~~~~f~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~ 177 (316)
T Consensus 95 ~ylv~e~~-g~~L-----------~~~~----k~-~~l~--------e~~i------------~~i~~Qil~aL~ylH~- 136 (343)
T cd07880 95 FYLVMPFM-GTDL-----------GKLM----KH-EKLS--------EDRI------------QFLVYQMLKGLKYIHA- 136 (343)
T ss_pred EEEEEECC-CCCH-----------HHHH----HC-CCCC--------HHHH------------HHHHHHHHHHHHHHHH-
T ss_conf 79999468-8679-----------9998----64-9989--------9999------------9999999999999997-
Q ss_pred HHHCCCCCEEECCCCCCCEEECCCCCEEEECCCCCCC
Q ss_conf 5210777444022346422562796048731621356
Q gi|254780795|r 178 WPKNLPTGIIHADLFPDNVLFYNNKIMGLIDFYFSCN 214 (316)
Q Consensus 178 ~~~~Lp~g~IHgDl~~~NiL~~~~~i~giIDF~~~~~ 214 (316)
T Consensus 137 ------~gIiHRDLKPeNILl~~~~~vKl~DFGla~~ 167 (343)
T cd07880 137 ------AGIIHRDLKPGNLAVNEDCELKILDFGLARQ 167 (343)
T ss_pred ------CCCCCCCCCHHHEEECCCCCEEEEECCCCCC
T ss_conf ------8964156743656886778579734567744