HHsearch alignment for GI: 254780795 and conserved domain: pfam01633
>pfam01633 Choline_kinase Choline/ethanolamine kinase. Choline kinase catalyses the committed step in the synthesis of phosphatidylcholine by the CDP-choline pathway. This alignment covers the protein kinase portion of the protein. The divergence of this family makes it very difficult to create a model that specifically predicts choline/ethanolamine kinases only. However if Choline_kinase_C is also present then it is definitely a member of this family.
Probab=99.71 E-value=5.2e-16 Score=123.28 Aligned_cols=176 Identities=18% Similarity=0.196 Sum_probs=111.5
Q ss_pred CCCEEEEEECCCCCH-HHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHHCCCCEEEEECCCCCCCCC---CCHHHHHH
Q ss_conf 995899982166998-89999999999985326775551001026778752245155786478870768---99899999
Q gi|254780795|r 45 KGTFILTIYEKRMNE-KDLPVFIELLHYISRNKLPCPIPIPRNDGKLYGFLCKKPANIFSFIKGSPLNH---ISDIHCEE 120 (316)
Q Consensus 45 ~~~yiLri~e~~~~~-~~l~~~~~ll~~L~~~gipvP~pi~~~~G~~~~~~~~k~~~L~~~i~G~~~~~---~~~~~~~~ 120 (316)
T Consensus 2 ~~~vl~Ri~G~~te~~IdR~~E~~~~~~l~~~gl~-p~~~~~f~~----------~~i~efi~g~~l~~~dl~~~~~~~~ 70 (208)
T pfam01633 2 PRKVLVRIYGAGTELFIDRETEIVIFALLSERGLG-PKLYGFFPN----------GRVEEFIPSRTLSAEDLRDPEISKK 70 (208)
T ss_pred CCEEEEECCCCCCCCEECHHHHHHHHHHHHHCCCC-CCEEEEECC----------CCEEEEECCCCCCHHHCCCHHHHHH
T ss_conf 98899985889857507789999999999985999-827999289----------8679978775389568259999999
Q ss_pred HHHHHHHHHHHCCCCCCCCCCCC-CHHHHHHHHHHHHHCC------CHHHHHHHHHHHHHHHHHH-HHCCCCCEEECCCC
Q ss_conf 99986436753068754332311-2456457667520015------5227889999999888765-21077744402234
Q gi|254780795|r 121 IGSMLASMHQKTKNFHLYRKNTL-SPLNLKFLWAKCFDKV------DEDLKKEIDHEFCFLKESW-PKNLPTGIIHADLF 192 (316)
Q Consensus 121 lG~~La~lH~~~~~f~~~r~~~~-~~~~~~~~~~~~~~~~------~~~~~~~l~~~l~~~~~~~-~~~Lp~g~IHgDl~ 192 (316)
T Consensus 71 ia~~L~~lH~~~~~~~~~-~~~~~~i~~y~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~l~~~l~~~~~~~v~cHNDL~ 149 (208)
T pfam01633 71 IAKRLREFHDIEPPGKKS-PSLWDTIRKWLKQAKELGESVNKSKGLKLIDLEDLEKEINELEKLLENLESPIVFCHNDLQ 149 (208)
T ss_pred HHHHHHHHHCCCCCCCCC-CCHHHHHHHHHHHHHHHCCCCHHHCCCCCCCHHHHHHHHHHHHHHHHHCCCCEEEEEECCC
T ss_conf 999999996687888899-8789999999999876123200102312014999999999999999616998166540588
Q ss_pred CCCEEEC--CCCCEEEECCCCCCCCHHHCCHHHHHHHHHHCCC
Q ss_conf 6422562--7960487316213568000198999986431168
Q gi|254780795|r 193 PDNVLFY--NNKIMGLIDFYFSCNDFLMYDLSICINAWCFDEN 233 (316)
Q Consensus 193 ~~NiL~~--~~~i~giIDF~~~~~~~~i~DLAi~i~~~c~~~~ 233 (316)
T Consensus 150 ~~Nil~~~~~~~l~-lID~EYag~n~~~fDiAn~F~E~~~~y~ 191 (208)
T pfam01633 150 PGNILLLESTNRLV-LIDFEYASYNYRAFDIANHFCEWAGDYH 191 (208)
T ss_pred CCCEEEECCCCEEE-EEEEEECCCCCHHHHHHHHHHHHHCCCC
T ss_conf 66665628998499-9988405668516749999999864558