HHsearch alignment for GI: 254780795 and conserved domain: pfam10009
>pfam10009 DUF2252 Uncharacterized protein conserved in bacteria (DUF2252). This domain, found in various hypothetical bacterial proteins, has no known function.
Probab=95.17 E-value=0.016 Score=35.96 Aligned_cols=73 Identities=15% Similarity=0.154 Sum_probs=37.1
Q ss_pred HHCCCCCEEECCCCCCCEEE--CC-CC-CEEEECCCCCCCCHHHCCHHHHHHHHHH-CCCCCCCHH----HHHHHHHHHH
Q ss_conf 21077744402234642256--27-96-0487316213568000198999986431-168887878----8999998876
Q gi|254780795|r 179 PKNLPTGIIHADLFPDNVLF--YN-NK-IMGLIDFYFSCNDFLMYDLSICINAWCF-DENNTYNPS----RGFSILNGYN 249 (316)
Q Consensus 179 ~~~Lp~g~IHgDl~~~NiL~--~~-~~-i~giIDF~~~~~~~~i~DLAi~i~~~c~-~~~~~~d~~----~~~~~l~gY~ 249 (316)
T Consensus 36 ~~~~~~v~icGD~Hl~NFG~~~s~eg~lvFdiNDFDEa~~gp~ewDlkRLa~S~~laa~~~gl~~~~~~~~v~~~~~~Y~ 115 (383)
T pfam10009 36 PPTGPRVWICGDCHLENFGLFASPEGRLVFDINDFDEALPGPFEWDLKRLAASLVLAARENGLSEKDARRLVRAFARSYR 115 (383)
T ss_pred CCCCCCEEEECCCHHHHCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHH
T ss_conf 87678546863511641577638898677568876534548729999999999999999869898999999999999999
Q ss_pred HC
Q ss_conf 41
Q gi|254780795|r 250 KV 251 (316)
Q Consensus 250 ~v 251 (316)
T Consensus 116 ~~ 117 (383)
T pfam10009 116 ER 117 (383)
T ss_pred HH
T ss_conf 99