HHsearch alignment for GI: 254780796 and conserved domain: PRK07238
>PRK07238 bifunctional RNase H/acid phosphatase; Provisional.
Probab=99.93 E-value=4.4e-26 Score=166.88 Aligned_cols=123 Identities=31% Similarity=0.405 Sum_probs=99.3
Q ss_pred EEEEEECCCCCCCCCCCEEEEEEECCCCE---EEEECCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEECCHHHCCCCC
Q ss_conf 89999664757999821899999618812---78602227663027899999986411345--40378840645503256
Q gi|254780796|r 8 EVHAYTDGACSGNPGPGGWGVLLRYKGKE---KIISGGEKETTNNRMELMAAIKALTALKY--PCKVLLYTDSSYVHKGF 82 (152)
Q Consensus 8 ~i~IytDGS~~~n~~~aG~g~v~~~~~~~---~~~~~~~~~~Tnn~aEl~Ai~~AL~~~~~--~~~i~I~tDS~yvv~~i 82 (152)
T Consensus 2 ~~~i~~DG~srgNPG~a~~g~v~~~~~~~~~~~~~~~~~g~~TNN~AEY~ali~gL~~a~~~~~~~~~v~~DS~Lvv~Q~ 81 (375)
T PRK07238 2 KVVVEADGGSRGNPGPAGYGAVVWDADRGTVLAERAQAIGRATNNVAEYRGLIAGLEAAAELGATEVEVRMDSKLVVEQM 81 (375)
T ss_pred EEEEECCCCCCCCCCCCCEEEEEEECCCCCEEEEEEHHHCCCCHHHHHHHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH
T ss_conf 29998167778987613517999957999488541004355302899999999999999976998699971689999985
Q ss_pred CCHHHHHHHHHHHCCCCCCCCCC---HHHHHHHHHCCCC-CEEEEEECCCCCCHHHHHHHHHHHHHHHHH
Q ss_conf 52256776543200355642110---0023454102221-055898017888845589999999999988
Q gi|254780796|r 83 SQWIKKWQQNGWKTSDKKTVKNI---DLWMKFVEASAQH-KVDLYWIKGHAGNQENEKVDRIARNAAVSF 148 (152)
Q Consensus 83 ~~~~~~W~~n~wk~~~~~~v~N~---dl~~~l~~l~~~~-~v~~~~V~gH~g~~~N~~AD~lA~~aa~~~ 148 (152)
T Consensus 82 ~G--------~~k------vk~~~l~~l~~~a~~l~~~f~~v~~~~vp----R~~N~~AD~laN~alD~~ 133 (375)
T PRK07238 82 SG--------RWK------VKHPDMKPLAAQARELAAQFGRVTYTWIP----RARNAHADRLANEAMDAA 133 (375)
T ss_pred CC--------CCC------CCCCCHHHHHHHHHHHHHCCCCEEEEEEE----CHHHHHHHHHHHHHHHHH
T ss_conf 39--------423------48800899999999997237816899834----044079999999875343