HHsearch alignment of GI: 254780796 and MMDB domain: 2ehg_A_
>2ehg_A (A:) Ribonuclease HI; RNAse HI, hyperthermophilic archaeon, double-stranded RNA-dependent RNAse, hydrolase; 1.60A {Sulfolobus tokodaii str}
Probab=99.86 E-value=7.3e-22 Score=142.80 Aligned_cols=128 Identities=23% Similarity=0.345 Sum_probs=93.5
Q ss_pred EEEEECCCCC-CCC-CCCEEEEEEECCCCEEEE-E----CCCCCCCHHHHHHHHHHHHHHCCCC--CCEEEEECCHHHCC
Q ss_conf 9999664757-999-821899999618812786-0----2227663027899999986411345--40378840645503
Q gi|254780796|r 9 VHAYTDGACS-GNP-GPGGWGVLLRYKGKEKII-S----GGEKETTNNRMELMAAIKALTALKY--PCKVLLYTDSSYVH 79 (152)
Q Consensus 9 i~IytDGS~~-~n~-~~aG~g~v~~~~~~~~~~-~----~~~~~~Tnn~aEl~Ai~~AL~~~~~--~~~i~I~tDS~yvv 79 (152)
|+|||||||. +++ +++|||+++...+..... . ......|||+|||.|++.||+.+.. ...+.|++||++++
T Consensus 2 i~iytDgs~~~~~~~~~~G~G~vl~~~~~~~~~~s~~~~~~~~~~tn~~aEl~Ai~~al~~~~~~~~~~~~i~~ds~~~~ 81 (149)
T 2ehg_A 2 IIGYFDGLCEPKNPGGIATFGFVIYLDNRKIEGYGLAEKPFSINSTNNVAEYSGLICLMETMLRLGISSPIIKGDSQLVI 81 (149)
T ss_dssp CEEEEEEEEESSSSSSEEEEEEEEECSSCEEEEEEECSCTTCTTCCHHHHHHHHHHHHHHHHHHHTCCSCEEEESCHHHH
T ss_pred EEEEEEECCCCCCCCCCEEEEEEEEECCCEEEEEEEEECCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCEEEECCCEEEE
T ss_conf 99999516899998939899999998996799888751156777663799999999877610100122103760473998
Q ss_pred CCCCCHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHCCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHHHHC
Q ss_conf 256522567765432003556421100023454102221055898017888845589999999999988731
Q gi|254780796|r 80 KGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGNQENEKVDRIARNAAVSFKNK 151 (152)
Q Consensus 80 ~~i~~~~~~W~~n~wk~~~~~~v~N~dl~~~l~~l~~~~~v~~~~V~gH~g~~~N~~AD~lA~~aa~~~k~~ 151 (152)
..+ .++|+.+......+.+ .+..+...++|+|.|||+ .+|+.||.||+.|+....+.
T Consensus 82 ~~~--------~~~~~~~~~~~~~~~~---~~~~l~~~~~v~~~~vpr----~~N~~AD~LAr~a~~~~~~~ 138 (149)
T 2ehg_A 82 KQM--------NGEYKVKAKRIIPLYE---KAIELKKKLNATLIWVPR----EENKEADRLSRVAYELVRRG 138 (149)
T ss_dssp HHH--------TTSSCCCCTTHHHHHH---HHHHHHHHHTCEEEECCG----GGCHHHHHHHHHHHHHHHTT
T ss_pred EEC--------CCCCCCCCHHHHHHHH---HHHHHHHCCCEEEEECCC----HHHHHHHHHHHHHHHHHCCC
T ss_conf 732--------3443546878999999---999997239569998784----44069999999996464289