PSIBLAST alignment of GI: 254780796 and protein with PDB id: 1ikw
>gi|14488554|pdb|1IKW|A Chain A, Wild Type Hiv-1 Reverse Transcriptase In Complex With Efavirenz Length = 560
>gi|291191124|pdb|3ISN|C Chain C, Crystal Structure Of Hiv-1 Rt Bound To A 6-Vinylpyrimidine Inhibitor Length = 560
Score = 46.4 bits (108), Expect = 0.001, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 18/137 (13%)
Query: 12 YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
Y DGA + G G + ++ + + A++ +V +
Sbjct: 441 YVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTQLQAIYLALQ-----DSGLEVNI 495
Query: 72 YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGN 131
TDS Y G + ++ + + + KV L W+ H G
Sbjct: 496 VTDSQYA-------------LGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGI 542
Query: 132 QENEKVDRIARNAAVSF 148
NE+VD++
Sbjct: 543 GGNEQVDKLVSAGIRKI 559