PSIBLAST alignment of GI: 254780796 and protein with PDB id: 1jl2
>gi|18655792|pdb|1JL2|A Chain A, Crystal Structure Of Tceo Rnase H-A Chimera Combining The Folding Core From T. Thermophilus Rnase H And The Remaining Region Of E. Coli Rnase H Length = 156
>gi|18655793|pdb|1JL2|B Chain B, Crystal Structure Of Tceo Rnase H-A Chimera Combining The Folding Core From T. Thermophilus Rnase H And The Remaining Region Of E. Coli Rnase H Length = 156
Score = 130 bits (327), Expect = 6e-29, Method: Composition-based stats.
Identities = 74/143 (51%), Positives = 103/143 (72%), Gaps = 1/143 (0%)
Query: 6 LREVHAYTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKY 65
L++V +TDG+ GNPGPGG+G +LRY+G+EK S G TTNNRMEL AAI+ L ALK
Sbjct: 2 LKQVEIFTDGSALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELKAAIEGLKALKE 61
Query: 66 PCKVLLYTDSSYVHKGFSQWI-KKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYW 124
P +V LYTDS Y+ K F++ + W++ GW+T++ K VKN DLW + A A H+V ++
Sbjct: 62 PAEVDLYTDSHYLKKAFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHF 121
Query: 125 IKGHAGNQENEKVDRIARNAAVS 147
+KGHAG+ ENE+ D +AR AA++
Sbjct: 122 VKGHAGHPENERADELARAAAMN 144