PSIBLAST alignment of GI: 254780796 and protein with PDB id: 1jl2

>gi|18655792|pdb|1JL2|A Chain A, Crystal Structure Of Tceo Rnase H-A Chimera Combining The Folding Core From T. Thermophilus Rnase H And The Remaining Region Of E. Coli Rnase H Length = 156
>gi|18655793|pdb|1JL2|B Chain B, Crystal Structure Of Tceo Rnase H-A Chimera Combining The Folding Core From T. Thermophilus Rnase H And The Remaining Region Of E. Coli Rnase H Length = 156
 Score =  130 bits (327), Expect = 6e-29,   Method: Composition-based stats.
 Identities = 74/143 (51%), Positives = 103/143 (72%), Gaps = 1/143 (0%)

Query: 6   LREVHAYTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKY 65
           L++V  +TDG+  GNPGPGG+G +LRY+G+EK  S G   TTNNRMEL AAI+ L ALK 
Sbjct: 2   LKQVEIFTDGSALGNPGPGGYGAILRYRGREKTFSAGYTRTTNNRMELKAAIEGLKALKE 61

Query: 66  PCKVLLYTDSSYVHKGFSQWI-KKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYW 124
           P +V LYTDS Y+ K F++   + W++ GW+T++ K VKN DLW   + A A H+V  ++
Sbjct: 62  PAEVDLYTDSHYLKKAFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHRVRFHF 121

Query: 125 IKGHAGNQENEKVDRIARNAAVS 147
           +KGHAG+ ENE+ D +AR AA++
Sbjct: 122 VKGHAGHPENERADELARAAAMN 144