PSIBLAST alignment of GI: 254780796 and protein with PDB id: 1rdh
>gi|576255|pdb|1RDH|A Chain A, Crystallographic Analyses Of An Active Hiv-1 Ribonuclease H Domain Show Structural Features That Distinguish It From The Inactive Form Length = 146
>gi|576256|pdb|1RDH|B Chain B, Crystallographic Analyses Of An Active Hiv-1 Ribonuclease H Domain Show Structural Features That Distinguish It From The Inactive Form Length = 146
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 18/137 (13%)
Query: 12 YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
Y DGA + G G + ++ + + A++ +V +
Sbjct: 27 YVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQ-----DSGLEVNI 81
Query: 72 YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGN 131
TDS Y G + ++ + + + KV L W+ H G
Sbjct: 82 VTDSQYA-------------LGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGI 128
Query: 132 QENEKVDRIARNAAVSF 148
NE+VD++
Sbjct: 129 GGNEQVDKLVSAGIRKI 145