PSIBLAST alignment of GI: 254780796 and protein with PDB id: 1s6p
>gi|49258902|pdb|1S6P|A Chain A, Crystal Structure Of Human Immunodeficiency Virus Type 1 Reverse Transcriptase (Rt) In Complex With Janssen-R100943 Length = 560
>gi|49258904|pdb|1S6Q|A Chain A, Crystal Structure Of Hiv-1 Reverse Transcriptase (Rt) In Complex With Janssen-R147681 Length = 560
Score = 46.0 bits (107), Expect = 0.002, Method: Composition-based stats.
Identities = 23/137 (16%), Positives = 43/137 (31%), Gaps = 18/137 (13%)
Query: 12 YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
Y DGA + G G + ++ + + A++ +V +
Sbjct: 441 YVDGAANRETKLGKAGYVTNKGRQKVVPLTNTTNQKTELQAIYLALQ-----DSGLEVNI 495
Query: 72 YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHAGN 131
TDS Y G + ++ + + + KV L W+ H G
Sbjct: 496 VTDSQYA-------------LGIIQAQPDKSESELVNQIIEQLIKKEKVYLAWVPAHKGI 542
Query: 132 QENEKVDRIARNAAVSF 148
NE+VD++
Sbjct: 543 GGNEQVDKLVSAGIRKI 559