PSIBLAST alignment of GI: 254780796 and protein with PDB id: 3p1g
>gi|308388210|pdb|3P1G|A Chain A, Crystal Structure Of The Xenotropic Murine Leukemia Virus-Related Virus (Xmrv) Rnase H Domain Length = 165
Score = 47.1 bits (110), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/144 (18%), Positives = 45/144 (31%), Gaps = 20/144 (13%)
Query: 12 YTDGAC--SGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKV 69
YTDG+ G V E I + T+ + + A+ + K+
Sbjct: 27 YTDGSSFLQEGQRRAGAAV---TTETEVIWARALPAGTSAQRAELIALTQALKMAEGKKL 83
Query: 70 LLYTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGHA 129
+YTDS Y + + ++ ++ + GH
Sbjct: 84 NVYTDSRYAFATAHVHSEGREIKN----------KNEILALLKALFLPKRLSIIHCPGHQ 133
Query: 130 -GN----QENEKVDRIARNAAVSF 148
GN + N D+ AR AA+
Sbjct: 134 KGNSAEARGNRMADQAAREAAMKA 157