RPSBLAST alignment of GI: 254780796 and protein with PDBid: 1ril

>1ril_A Ribonuclease H; hydrolase(endoribonuclease); 2.80A {Thermus thermophilus} SCOP: c.55.3.1 PDB: 2rpi_A Length = 166

 Score =  123 bits (309), Expect = 1e-29
 Identities = 77/146 (52%), Positives = 100/146 (68%), Gaps = 1/146 (0%)

Query: 1   MDSKHLREVHAYTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKAL 60
           M+    + V  +TDGAC GNPGPGGW  LLR+   EK++SGGE  TTNNRMEL AAI+ L
Sbjct: 1   MNPSPRKRVALFTDGACLGNPGPGGWAALLRFHAHEKLLSGGEACTTNNRMELKAAIEGL 60

Query: 61  TALKYPCKVLLYTDSSYVHKGFSQWIKKWQQ-NGWKTSDKKTVKNIDLWMKFVEASAQHK 119
            ALK PC+V LYTDS Y+ K F++   +  +  GW+T++ K VKN DLW   + A A H+
Sbjct: 61  KALKEPCEVDLYTDSHYLKKAFTEGWLEGWRKRGWRTAEGKPVKNRDLWEALLLAMAPHR 120

Query: 120 VDLYWIKGHAGNQENEKVDRIARNAA 145
           V  +++KGH G+ ENE+VDR AR  A
Sbjct: 121 VRFHFVKGHTGHPENERVDREARRQA 146