RPSBLAST alignment of GI: 254780796 and protein with PDBid: 2kq2

>2kq2_A Ribonuclease H-related protein; PSI, NESG, protein structure, APO enzyme, structural genomics, protein structure initiative; NMR {Desulfitobacterium hafniense dcb-2} PDB: 2kw4_A Length = 147

 Score =  117 bits (295), Expect = 8e-28
 Identities = 35/152 (23%), Positives = 55/152 (36%), Gaps = 24/152 (15%)

Query: 1   MDSKHLREVHAYTDGACSGNPGPGGWGVLLRYKGKE-KIISGGEKETTNNRM-----ELM 54
           MD +   E   YTDG+     G   W       GK     +   K      M     E+ 
Sbjct: 1   MDDR--TEYDVYTDGSY--VNGQYAWAYAFVKDGKVHYEDADVGKNPAAATMRNVAGEIA 56

Query: 55  AAIKALT-ALKYPCKVLLYTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVE 113
           AA+ A+  A +   K+ +  D           I  W    WK  ++ T     L  ++  
Sbjct: 57  AALYAVKKASQLGVKIRILHD--------YAGIAFWATGEWKAKNEFTQAYAKLMNQY-- 106

Query: 114 ASAQHKVDLYWIKGHAGNQENEKVDRIARNAA 145
              +       +K H+GN+ N+ VD  A++A 
Sbjct: 107 ---RGIYSFEKVKAHSGNEFNDYVDMKAKSAL 135