RPSBLAST alignment of GI: 254780796 and SCOP domain: d1s1ta1

Alignment

 Score = 95.4 bits (237), Expect = 2e-21
 Identities = 25/117 (21%), Positives = 38/117 (32%), Gaps = 18/117 (15%)

Query: 12  YTDGACSGNPGPGGWGVLLRYKGKEKIISGGEKETTNNRMELMAAIKALTALKYPCKVLL 71
           Y DGA +     G  G +       +       +TTN + EL A   AL       +V +
Sbjct: 12  YVDGAANRETKLGKAGYVTNR---GRQKVVTLTDTTNQKTELQAIYLALQDS--GLEVNI 66

Query: 72  YTDSSYVHKGFSQWIKKWQQNGWKTSDKKTVKNIDLWMKFVEASAQHKVDLYWIKGH 128
            TDS Y          + +        ++ +K               KV L W+  H
Sbjct: 67  VTDSQYALGIIQAQPDQSESELVNQIIEQLIKK-------------EKVYLAWVPAH 110

SCOP domain information

class: Alpha and beta proteins (a/b)
fold: Ribonuclease H-like motif
superfamily: Ribonuclease H-like
family: Ribonuclease H
domain: HIV RNase H (Domain of reverse transcriptase)
species: Human immunodeficiency virus type 1 [TaxId: 11676]