HHsearch alignment of GI: 254780797 and MMDB domain: 1sr4_B_1-105_229-261
>1sr4_B (B:1-105,B:229-261) CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi}
Probab=95.41 E-value=0.02 Score=31.15 Aligned_cols=43 Identities=26% Similarity=0.498 Sum_probs=26.0
Q ss_pred CEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHH-HHHHHHHHHCC-CCEEEEECCCC
Q ss_conf 548998873100767775566676666879999-99999997518-98999972799
Q gi|254780797|r 5 QRIRIASWNINNLSEKSGVALFKNSVIREDNDY-ALLQKYAEQLD-ADIVCLQEIGS 59 (231)
Q Consensus 5 ~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~-~~i~~~i~~~~-~DVi~LQEv~~ 59 (231)
+..+|+|||++.-+ ..++... -.+..+|...+ .||+++||...
T Consensus 3 ~D~~v~TWNlQGSS------------A~TESKWn~~Vrqli~G~n~~dIlmiQEAGs 47 (138)
T 1sr4_B 3 SDFKVATWNLQGSS------------AVNESKWNINVRQLLSGEQGADILMVQEAGS 47 (138)
T ss_dssp GGSCEEEEECCCCS------------SSSHHHHHHHHHHHHCSTTCCSEEEEESCCS
T ss_pred CCCEEEEEECCCCC------------CCCCCCCHHHHHHHHHHCCCCCEEEEECCCC
T ss_conf 78889999789587------------8754320699999998568989999983676