HHsearch alignment of GI: 254780797 and MMDB domain: 2f1n_A_

>2f1n_A (A:) CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli}
Probab=98.76  E-value=7.1e-08  Score=60.13  Aligned_cols=152  Identities=20%  Similarity=0.267  Sum_probs=73.4

Q ss_pred             CEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHC-CCCEEEEECCCCHHH----HHHHHCCC---CCEEE
Q ss_conf             5489988731007677755666766668799999-999999751-898999972799889----99872623---22167
Q gi|254780797|r    5 QRIRIASWNINNLSEKSGVALFKNSVIREDNDYA-LLQKYAEQL-DADIVCLQEIGSYEA----IKRVFPND---KWDIL   75 (231)
Q Consensus         5 ~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~i~~~-~~DVi~LQEv~~~~~----~~~~~~~~---~~~~~   75 (231)
                      +..||+|||++.-+            ..++.+.. .+..+|... ..||+++||...--.    ........   -.+|.
T Consensus        14 ~d~~v~TWNlQGss------------a~tesKWn~~Vrqli~g~n~~dIl~iQEAG~lP~sA~~t~r~~~~~g~pv~Ey~   81 (262)
T 2f1n_A           14 TDFRVATWNLQGAS------------ATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIPVRELI   81 (262)
T ss_dssp             GGCCEEEEEEEECT------------TSCHHHHHTHHHHHHSSTTCCSEEEEEEECSCCTTCEECCCCCCCSSCCCEEEE
T ss_pred             CCEEEEEEECCCCC------------CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHH
T ss_conf             87299998208776------------765454079999999738999999998278533531567654321455300000


Q ss_pred             -------------EEECCCCCCCCEE--EEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEE
Q ss_conf             -------------7403578765035--6886146410100001221467565544575049999984997899999751
Q gi|254780797|r   76 -------------YSGSNTDKHAMHT--AIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHL  140 (231)
Q Consensus        76 -------------~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL  140 (231)
                                   .+....+...-+.  ++.++........         ........|+++.+.+..    -.++++|-
T Consensus        82 Wnlgt~sRp~~vyIYys~vD~ganRvNlAIVSr~~ADev~v---------l~p~~~~sRPiiGIRign----d~FFtiHA  148 (262)
T 2f1n_A           82 WNLSTNSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVFV---------LSPVRQGGRPLLGIRIGN----DAFFTAHA  148 (262)
T ss_dssp             EECCSSSSSCEEEEEEECSCSSSCSSCEEEEESSCCSEEEE---------ECCSSTTCCCEEEEEETT----EEEEEEEC
T ss_pred             HCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEE---------CCCCCCCCCCEEEEEECC----EEEEEEEE
T ss_conf             02221358734799974256433042229997025545324---------278655565206999899----69999982


Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEEEEEECCCCCCC
Q ss_conf             16888875430025457887548999999999740---488789999136888462
Q gi|254780797|r  141 KSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKN---NLNMPFIIAGDFNRKINH  193 (231)
Q Consensus       141 ~s~~~~~~~~~~~~~~~~~~~~q~~~l~~~i~~~~---~~~~~vii~GDFN~~~~~  193 (231)
                      .|+...+..            .-+..+..+.....   .+..+.+++||||..+..
T Consensus       149 la~GG~DA~------------aiV~~V~~~f~~~~~p~~p~~~W~I~GDFNR~P~~  192 (262)
T 2f1n_A          149 IAMRNNDAP------------ALVEEVYNFFRDSRDPVHQALNWMILGDFNREPAD  192 (262)
T ss_dssp             CSSSSCSHH------------HHHHHHHHHHHTCSSHHHHTCEEEEEEECSSCHHH
T ss_pred             CCCCCCCHH------------HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
T ss_conf             599973279------------99999999999988754578987997601258623