HHsearch alignment of GI: 254780797 and MMDB domain: 2f1n_A_
>2f1n_A (A:) CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli}
Probab=98.76 E-value=7.1e-08 Score=60.13 Aligned_cols=152 Identities=20% Similarity=0.267 Sum_probs=73.4
Q ss_pred CEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHH-HHHHHHHHC-CCCEEEEECCCCHHH----HHHHHCCC---CCEEE
Q ss_conf 5489988731007677755666766668799999-999999751-898999972799889----99872623---22167
Q gi|254780797|r 5 QRIRIASWNINNLSEKSGVALFKNSVIREDNDYA-LLQKYAEQL-DADIVCLQEIGSYEA----IKRVFPND---KWDIL 75 (231)
Q Consensus 5 ~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~-~i~~~i~~~-~~DVi~LQEv~~~~~----~~~~~~~~---~~~~~ 75 (231)
+..||+|||++.-+ ..++.+.. .+..+|... ..||+++||...--. ........ -.+|.
T Consensus 14 ~d~~v~TWNlQGss------------a~tesKWn~~Vrqli~g~n~~dIl~iQEAG~lP~sA~~t~r~~~~~g~pv~Ey~ 81 (262)
T 2f1n_A 14 TDFRVATWNLQGAS------------ATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVDTGRVIPSPGIPVRELI 81 (262)
T ss_dssp GGCCEEEEEEEECT------------TSCHHHHHTHHHHHHSSTTCCSEEEEEEECSCCTTCEECCCCCCCSSCCCEEEE
T ss_pred CCEEEEEEECCCCC------------CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCCCCCCHHHHHHHHCCCCCCCHHH
T ss_conf 87299998208776------------765454079999999738999999998278533531567654321455300000
Q ss_pred -------------EEECCCCCCCCEE--EEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEE
Q ss_conf -------------7403578765035--6886146410100001221467565544575049999984997899999751
Q gi|254780797|r 76 -------------YSGSNTDKHAMHT--AIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHL 140 (231)
Q Consensus 76 -------------~~~~~~~~~~~~~--g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL 140 (231)
.+....+...-+. ++.++........ ........|+++.+.+.. -.++++|-
T Consensus 82 Wnlgt~sRp~~vyIYys~vD~ganRvNlAIVSr~~ADev~v---------l~p~~~~sRPiiGIRign----d~FFtiHA 148 (262)
T 2f1n_A 82 WNLSTNSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVFV---------LSPVRQGGRPLLGIRIGN----DAFFTAHA 148 (262)
T ss_dssp EECCSSSSSCEEEEEEECSCSSSCSSCEEEEESSCCSEEEE---------ECCSSTTCCCEEEEEETT----EEEEEEEC
T ss_pred HCCCCCCCCCEEEEEEECCCCCCEEEEEEEEEECCCCCCEE---------CCCCCCCCCCEEEEEECC----EEEEEEEE
T ss_conf 02221358734799974256433042229997025545324---------278655565206999899----69999982
Q ss_pred CCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHC---CCCCCEEEEEECCCCCCC
Q ss_conf 16888875430025457887548999999999740---488789999136888462
Q gi|254780797|r 141 KSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKN---NLNMPFIIAGDFNRKINH 193 (231)
Q Consensus 141 ~s~~~~~~~~~~~~~~~~~~~~q~~~l~~~i~~~~---~~~~~vii~GDFN~~~~~ 193 (231)
.|+...+.. .-+..+..+..... .+..+.+++||||..+..
T Consensus 149 la~GG~DA~------------aiV~~V~~~f~~~~~p~~p~~~W~I~GDFNR~P~~ 192 (262)
T 2f1n_A 149 IAMRNNDAP------------ALVEEVYNFFRDSRDPVHQALNWMILGDFNREPAD 192 (262)
T ss_dssp CSSSSCSHH------------HHHHHHHHHHHTCSSHHHHTCEEEEEEECSSCHHH
T ss_pred CCCCCCCHH------------HHHHHHHHHHHHHHHHHCCCCCEEEEEECCCCCCH
T ss_conf 599973279------------99999999999988754578987997601258623