HHsearch results for GI: 254780797 and protein with PDBid: 2voa_A
>2voa_A AF_EXO, XTHA, exodeoxyribonuclease III; EXOIII, AP endonuclease, lyase; 1.7A {Archaeoglobus fulgidus}
Probab=99.40 E-value=5.7e-12 Score=81.13 Aligned_cols=148 Identities=18% Similarity=0.212 Sum_probs=66.4
Q ss_pred EEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCC--HHHHHHHHCCCCCEEEEEECCCCCC
Q ss_conf 89988731007677755666766668799999999999751898999972799--8899987262322167740357876
Q gi|254780797|r 7 IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGS--YEAIKRVFPNDKWDILYSGSNTDKH 84 (231)
Q Consensus 7 lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~--~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (231)
|||+||||+.+ + ++.+.+.++|++.+|||||||||.. .......+...++.+..... ..
T Consensus 2 mKI~T~NvnG~------------r----~r~~~~~~~i~~~~pDIi~lQEvk~~~~~~~~~~~~~~~~~~~~~~~---~~ 62 (257)
T 2voa_A 2 LKIATFNVNSI------------R----SRLHIVIPWLKENKPDILCMQETKVENRKFPEADFHRIGYHVVFSGS---KG 62 (257)
T ss_dssp EEEEEEECSCG------------G----GTHHHHHHHHHHHCCSEEEEECCCCCGGGCCHHHHHTTTCEEEEEEE---TT
T ss_pred EEEEEEEECHH------------H----HHHHHHHHHHHHCCCCEEEEEECCCCHHHCCHHHHHHCCCEEEECCC---CC
T ss_conf 19999980529------------9----86998899998689969999967669244788787313631465034---77
Q ss_pred CCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHHHH
Q ss_conf 50356886146410100001221467565544575049999984997899999751168888754300254578875489
Q gi|254780797|r 85 AMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQA 164 (231)
Q Consensus 85 ~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~~~~~~~~~~~~~~~~q~ 164 (231)
....++..+..+.... .... .......+. ..... ..+.++++|+.......... ........
T Consensus 63 ~~~~~~~~~~~~~~~~--~~~~-----~~~~~~~~~---~~~~~--~~~~~~~~~~~~~~~~~~~~------~~~~~~~~ 124 (257)
T 2voa_A 63 RNGVAIASLEEPEDVS--FGLD-----SEPKDEDRL---IRAKI--AGIDVINTYVPQGFKIDSEK------YQYKLQWL 124 (257)
T ss_dssp EEEEEEEESSCCEEEE--ESCS-----SSSCCGGGE---EEEEE--TTEEEEEEECCCCSCTTSHH------HHHHHHHH
T ss_pred CCCCEEEECCCCEEEE--ECCC-----CCCCCCCEE---EEEEE--CCEEEEEEEEECCCCCCHHH------HHHHHHHH
T ss_conf 6661133047850588--4242-----123566458---99872--67599999830687797688------88888778
Q ss_pred HHHHHHHHHHCCCCCCEEEEEECCCCC
Q ss_conf 999999997404887899991368884
Q gi|254780797|r 165 TWLKQWVDQKNNLNMPFIIAGDFNRKI 191 (231)
Q Consensus 165 ~~l~~~i~~~~~~~~~vii~GDFN~~~ 191 (231)
...............+++++||||...
T Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~~~~~ 151 (257)
T 2voa_A 125 ERLYHYLQKTVDFRSFAVWCGDMNVAP 151 (257)
T ss_dssp HHHHHHHHHHCCTTSCEEEEEECSCCC
T ss_pred HHHHHHHHHHHHHCCCCCCCCCCCCCC
T ss_conf 999999998664202323333101384