HHsearch results for GI: 254780797 and protein with PDBid: 3g91_A
>3g91_A MTH0212, exodeoxyribonuclease; double-strand specific 3'-5' exonuclease, AP endonuclease; HET: PG4; 1.23A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fzi_A 3g0a_A 3g1k_A 3g2c_A 3g3c_A* 3g3y_A* 3g4t_A* 3g00_A 3g0r_A* 3g2d_A* 3g38_A 3g8v_A* 3ga6_A
Probab=99.47 E-value=2.2e-12 Score=83.38 Aligned_cols=153 Identities=18% Similarity=0.201 Sum_probs=72.8
Q ss_pred CEEEEEEEEHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEEEECCCCH--HHHHHHHCCCCCEEEEEECCCC
Q ss_conf 54899887310076777556667666687999999999997518989999727998--8999872623221677403578
Q gi|254780797|r 5 QRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSY--EAIKRVFPNDKWDILYSGSNTD 82 (231)
Q Consensus 5 ~~lrv~twNi~~~~~~~~~~~~~~~~~~~~~~~~~i~~~i~~~~~DVi~LQEv~~~--~~~~~~~~~~~~~~~~~~~~~~ 82 (231)
.-|||+||||+++ ++ .+.+.+.++|++.+|||||||||... ..........++.+.+... ..
T Consensus 2 ~~mki~SwNvngl--------------~~-~~~~~~~~~i~~~~pDIi~LQEvk~~~~~~~~~~~~~~~~~~~~~~~-~~ 65 (265)
T 3g91_A 2 AVLKIISWNVNGL--------------RA-VHRKGFLKWFMEEKPDILCLQEIKAAPEQLPRKLRHVEGYRSFFTPA-ER 65 (265)
T ss_dssp CEEEEEEEECSCH--------------HH-HHHHTHHHHHHHHCCSEEEEECCCSCGGGSCHHHHCCTTCEEEEECB-SS
T ss_pred CCEEEEEEEECCH--------------HH-HHHHHHHHHHHHCCCCEEEEECCCCCCCCCCHHHHHCCCCEEEEEEC-CC
T ss_conf 8609999992428--------------88-77773999997589969998815078000898787247861688612-22
Q ss_pred CCCCEEEEEEECCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEEECCEEEEEEEEEECCCCCCCCCCCHHHHHHHHHHH
Q ss_conf 76503568861464101000012214675655445750499999849978999997511688887543002545788754
Q gi|254780797|r 83 KHAMHTAIVIRKGAIHLLQKSYLPMDTEGLDSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNL 162 (231)
Q Consensus 83 ~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~~~~~~~~~~g~~~~v~n~HL~s~~~~~~~~~~~~~~~~~~~~ 162 (231)
......+++...+...... .... . .. ...... .... ...+.+.++|+....... ........
T Consensus 66 ~~~~~~~~~~~~~~~~~~~--~~~~----~-~~-~~~~~~-~~~~--~~~~~~~~~~~~~~~~~~-------~~~~~~~~ 127 (265)
T 3g91_A 66 KGYSGVAMYTKVPPSSLRE--GFGV----E-RF-DTEGRI-QIAD--FDDFLLYNIYFPNGAMSE-------ERLKYKLE 127 (265)
T ss_dssp TTSCCEEEEESSCCSEEEC--CCSC----H-HH-HSBSCE-EEEE--CSSCEEEEEECCCCTTCH-------HHHHHHHH
T ss_pred CCCCCEEEEECCCCCCCCC--CCCC----C-CC-CCHHEE-EEEE--CCCEEEEEEECCCCCCCC-------HHHHHHHH
T ss_conf 3224347863267520003--7887----6-53-402046-7552--298899999605886431-------12577889
Q ss_pred HHHHHHHHHHHHCCCCCCEEEEEECCCCC
Q ss_conf 89999999997404887899991368884
Q gi|254780797|r 163 QATWLKQWVDQKNNLNMPFIIAGDFNRKI 191 (231)
Q Consensus 163 q~~~l~~~i~~~~~~~~~vii~GDFN~~~ 191 (231)
....+..........+.+.+++||||...
T Consensus 128 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 156 (265)
T 3g91_A 128 FYDAFLEDVNRERDSGRNVIICGDFNTAH 156 (265)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEEECCCCC
T ss_pred HHHHHHHHHHHHHCCCCCEEEECCCCCCC
T ss_conf 99999999999854678467206510287