RPSBLAST alignment of GI: 254780797 and protein with PDBid: 1sr4

>1sr4_B CDT B, cytolethal distending toxin protein B; bacterial, virulence, DNA damage, genotoxin, cytotoxins, cell cycle, apoptosis, lectin; 2.00A {Haemophilus ducreyi} SCOP: d.151.1.1 PDB: 2f2f_B Length = 261

 Score = 50.9 bits (120), Expect = 2e-07
 Identities = 25/212 (11%), Positives = 58/212 (27%), Gaps = 29/212 (13%)

Query: 4   AQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGS---- 59
               ++A+WN+   S  +              +  + Q  + +  ADI+ +QE GS    
Sbjct: 2   LSDFKVATWNLQGSSAVNESKW----------NINVRQLLSGEQGADILMVQEAGSLPSS 51

Query: 60  -------YEAIKRVFPNDKWDILYSGSNTDKHAMHTAIVIRKGAIHLLQKSYLPMDTEGL 112
                   +          W++         +  ++ + +    ++L   S    D   +
Sbjct: 52  AVRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIVSRRQADEAFI 111

Query: 113 DSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVD 172
                          +         +H  +    D++               T       
Sbjct: 112 VHSDSSVLQSRPAVGIRIGTDVFFTVHALATGGSDAVSLIR--------NIFTTFNSSSS 163

Query: 173 QKNNLNMPFIIAGDFNRKINHSHSGIKDELWQ 204
                   +++ GDFNR   +    ++ E   
Sbjct: 164 PPERRVYSWMVVGDFNRAPANLEVALRQEPAV 195