RPSBLAST alignment of GI: 254780797 and protein with PDBid: 2f1n

>2f1n_A CDT B, cytolethal distending toxin subunit B; E.coli, DNAse I, microbatch; 1.73A {Escherichia coli} SCOP: d.151.1.1 Length = 262
 Score = 51.7 bits (122), Expect = 1e-07
 Identities = 31/203 (15%), Positives = 62/203 (30%), Gaps = 32/203 (15%)

Query: 4   AQRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEA- 62
               R+A+WN+             ++      +  + Q  + +   DI+ +QE GS  + 
Sbjct: 13  LTDFRVATWNLQGA----------SATTESKWNINVRQLISGENAVDILAVQEAGSPPST 62

Query: 63  ---IKRVFPNDKWDILYSGSNTDK-------HAMHTAIVIRKGAIHLLQKSYLPMDTEGL 112
                RV P+    +     N          +   +A+    G ++L   S    D   +
Sbjct: 63  AVDTGRVIPSPGIPVRELIWNLSTNSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVFV 122

Query: 113 DSKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVD 172
            S   +      L  +          H  +    D+           L  +     +   
Sbjct: 123 LSPVRQGG--RPLLGIRIGNDAFFTAHAIAMRNNDA---------PALVEEVYNFFRDSR 171

Query: 173 QKNNLNMPFIIAGDFNRKINHSH 195
              +  + ++I GDFNR+     
Sbjct: 172 DPVHQALNWMILGDFNREPADLE 194