RPSBLAST alignment of GI: 254780797 and SCOP domain: d1sr4b_

Alignment
>d1sr4b_ d.151.1.1 (B:) Cytolethal distending toxin subunit B {Haemophilus ducreyi [TaxId: 730]} Length = 261
 Score = 44.8 bits (104), Expect = 6e-06
 Identities = 24/196 (12%), Positives = 54/196 (27%), Gaps = 29/196 (14%)

Query: 5   QRIRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSY---- 60
              ++A+WN+   S  +              +  + Q  + +  ADI+ +QE GS     
Sbjct: 3   SDFKVATWNLQGSSAVNE----------SKWNINVRQLLSGEQGADILMVQEAGSLPSSA 52

Query: 61  -------EAIKRVFPNDKWDILYSGSNTDKHAMHTAIVIRKGAIHLLQKSYLPMDTEGLD 113
                  +          W++         +  ++ + +    ++L   S    D   + 
Sbjct: 53  VRTSRVIQHGGTPIEEYTWNLGTRSRPNMVYIYYSRLDVGANRVNLAIVSRRQADEAFIV 112

Query: 114 SKAGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQ 173
                         +         +H  +    D++               T        
Sbjct: 113 HSDSSVLQSRPAVGIRIGTDVFFTVHALATGGSDAVSLIRN--------IFTTFNSSSSP 164

Query: 174 KNNLNMPFIIAGDFNR 189
                  +++ GDFNR
Sbjct: 165 PERRVYSWMVVGDFNR 180

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Haemophilus ducreyi [TaxId: 730]