RPSBLAST alignment of GI: 254780797 and SCOP domain: d2f1na1

Alignment

 Score = 51.6 bits (122), Expect = 5e-08
 Identities = 27/208 (12%), Positives = 61/208 (29%), Gaps = 32/208 (15%)

Query: 7   IRIASWNINNLSEKSGVALFKNSVIREDNDYALLQKYAEQLDADIVCLQEIGSYEAIKRV 66
            R+A+WN+             ++      +  + Q  + +   DI+ +QE GS  +    
Sbjct: 5   FRVATWNLQGA----------SATTESKWNINVRQLISGENAVDILAVQEAGSPPSTAVD 54

Query: 67  -----------FPNDKWDILYSGSNTDKHAMHTAIVIRKGAIHLLQKSYLPMDTEGLDSK 115
                           W++  +      +   +A+    G ++L   S    D       
Sbjct: 55  TGRVIPSPGIPVRELIWNLSTNSRPQQVYIYFSAVDALGGRVNLALVSNRRADEVF--VL 112

Query: 116 AGKRRAVEILFEVDGRKIWLLDIHLKSFCFLDSIEDSYISSCYMLNLQATWLKQWVDQKN 175
           +  R+    L  +          H  +    D+              +     +      
Sbjct: 113 SPVRQGGRPLLGIRIGNDAFFTAHAIAMRNNDAPALVE---------EVYNFFRDSRDPV 163

Query: 176 NLNMPFIIAGDFNRKINHSHSGIKDELW 203
           +  + ++I GDFNR+       +   + 
Sbjct: 164 HQALNWMILGDFNREPADLEMNLTVPVR 191

SCOP domain information

class: Alpha and beta proteins (a+b)
fold: DNase I-like
superfamily: DNase I-like
family: DNase I-like
domain: Cytolethal distending toxin subunit B
species: Escherichia coli [TaxId: 562]