HHsearch alignment of GI: 254780798 and MMDB domain: 2v43_A_1-181
>2v43_A (A:1-181) RSEB, sigma-E factor regulatory protein RSEB; sensor for periplasmic stress, periplasmic, lipoprotein binding; 2.37A {Escherichia coli} PDB: 2v42_A 2p4b_A*
Probab=99.61 E-value=1e-18 Score=124.16 Aligned_cols=166 Identities=8% Similarity=0.041 Sum_probs=117.1
Q ss_pred CCHHHHHHHHHHHCCCEEEEEEEEEEC--C--CEEEEEEEEECCC-EEEEEECCCCEEEEEEECEEEEEEECCCCCCCCH
Q ss_conf 101799999986126706999999618--9--5599999996698-6999971664157775120599971333432101
Q gi|254780798|r 32 KDQSVKKAIEHFLSIQTMQGTFLQEDA--G--YVMKGEFFMARPS-KFYFKYSSPSSVSLISDGSNIAVYNAKLDTWSVY 106 (204)
Q Consensus 32 ~~~~~~~i~~~l~~~~t~~a~F~Q~~~--~--~~~~G~~~~kkP~-k~rw~y~~P~~~~iv~~g~~l~~~d~~~~q~~~~ 106 (204)
+++.+.++.+. .++++|+|+|+.. + ...++.....+|+ .+||+|.+|..+.++.||+.+|+|+|+.+++...
T Consensus 2 a~~il~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~dg~~~w~y~p~~~~~~~~ 78 (181)
T 2v43_A 2 SGALLQQMNLA---SQSLNYELSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLN 78 (181)
T ss_dssp ---CHHHHHHH---HHHHHHHSEEEEEEEEEETTEEEEEEEEEEEETTEEEEEEEECSSSCCEEEEETTEEEEECTTSCC
T ss_pred CCCCHHHHHHH---HHHHHHHCCEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEECCCCCEEEEEECCEEEEECCCCCE
T ss_conf 97049999999---998888578359999993991678999999749949999883699840899989999998689842
Q ss_pred HHHHH--HHHHHCCHHHHHHHHCCC------CCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCE-EEE
Q ss_conf 11111--233210001212221011------322357279972046666634799993698429999999679987-999
Q gi|254780798|r 107 PLRYM--AFSVIFSNNQHVIQESIQ------RVESNNSFITIFFKDDFMGNMISVTFDRLSYRLLNWKIMDSSRRY-SII 177 (204)
Q Consensus 107 ~~~~~--~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l~~~~i~D~~G~~-t~i 177 (204)
+.... ....+............. .........+...+.+.....+.++++.+++.+.++++.|..|+. +++
T Consensus 79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~g~~~~~l~l~pk~~~~~~~~lwid~~~~~p~k~~~~d~~g~~~~~i 158 (181)
T 2v43_A 79 GDYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKLPMRVDLLDRDGETLEQF 158 (181)
T ss_dssp EEEECSSCTTSSCGGGGCCHHHHTTTEEEEEEEEEEETTEEEEEEEEEETTSCSCEEEEEEETTTCCEEEEEEECTTSCE
T ss_pred EEEECCCCCCCCCCCCCCCHHHHHHCEEEEECCCCEECCCEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEEECCCCCE
T ss_conf 78755545555720034475567426027976874899948899999958887789999997677957999986489969
Q ss_pred EEEEEECCCCCCHHHCCCCCCCC
Q ss_conf 99743228868965512685313
Q gi|254780798|r 178 KILKYKENTVLDPKVFEIPYDKI 200 (204)
Q Consensus 178 ~f~ni~~N~~i~~~~F~f~~~~~ 200 (204)
.|++++.|.++++++|+|.+.+|
T Consensus 159 ~~~~~~~n~~i~~~~F~~~~~~~ 181 (181)
T 2v43_A 159 RVIAFNVNQDISSSMQTLAKANL 181 (181)
T ss_dssp EEEEEEEEEEEESSCCHHHHHHH
T ss_pred EEEEEEEEEEECCCCCHHHHHCC
T ss_conf 99999999983787685464211