HHsearch alignment of GI: 254780798 and MMDB domain: 3buu_A_
>3buu_A (A:) Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}
Probab=99.81 E-value=7e-19 Score=125.04 Aligned_cols=171 Identities=10% Similarity=0.037 Sum_probs=131.7
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEEEC-----CCEEEEEEEEECCCEEEEEECCCC---EEEEEEECEEEEEE
Q ss_conf 4034443101799999986126706999999618-----955999999966986999971664---15777512059997
Q gi|254780798|r 25 NAAYPITKDQSVKKAIEHFLSIQTMQGTFLQEDA-----GYVMKGEFFMARPSKFYFKYSSPS---SVSLISDGSNIAVY 96 (204)
Q Consensus 25 ~a~~~~~~~~~~~~i~~~l~~~~t~~a~F~Q~~~-----~~~~~G~~~~kkP~k~rw~y~~P~---~~~iv~~g~~l~~~ 96 (204)
+++.+..+++++.++.+.++++++++|+|+|+.. .....|++++++|+++||+|..|. .+.+++||+.+|.|
T Consensus 2 a~~~~~ta~~il~~~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~r~~~~~p~~~~~~~~~~dG~~~w~y 81 (229)
T 3buu_A 2 NAKSAVTAQSILEKADEIRFPQDSFQVNVAIRTAAPDHAEDLYRYQVLSKGNENSIVXITEPASERGQAILXKGRDLWVF 81 (229)
T ss_dssp ----CCCHHHHHHHHHHHHSCSSCEEEEEEEEEEETTEECCCEEEEEEEETTTEEEEEEEESTTTTTCEEEEETTEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHCCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEECCCCCEEE
T ss_conf 85234799999999986315788879999999965997579999999972893599999168533580899937651888
Q ss_pred ECCCCCCCCHHHHHHHHHHHCCHHHH---HHHHC--------CCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEE
Q ss_conf 13334321011111123321000121---22210--------11322357279972046666634799993698429999
Q gi|254780798|r 97 NAKLDTWSVYPLRYMAFSVIFSNNQH---VIQES--------IQRVESNNSFITIFFKDDFMGNMISVTFDRLSYRLLNW 165 (204)
Q Consensus 97 d~~~~q~~~~~~~~~~~~~~~~~~~~---~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l~~~ 165 (204)
+|.++++...+..+............ ..... ...+.....+.+.++........+.+++|.+++.+.++
T Consensus 82 ~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~v~g~~~~vl~~~pk~~~~~~~~~~l~id~~~~~p~k~ 161 (229)
T 3buu_A 82 XPSVSQPIRLSLSQRLTGQVANGDIARANFTGDYHPQLLRNESIDDEDYYVLELTGIDRSVTYQKVLLWVNQSNFRPYKA 161 (229)
T ss_dssp CTTCSSCEEECTTSEEETTEEHHHHHCCCSBTTEEEEEEEEEEETTEEEEEEEEEESSTTSSCSEEEEEEETTTCCEEEE
T ss_pred CCCCCCEEEECCCCCCCCCCCCCHHCCCCCCCCCEEEEEEEEEECCCCEEEEEEEECCCCCCCCEEEEEEECCCCEEEEE
T ss_conf 44458338925765657874422000043100233788300251564489999960787777645999998666368999
Q ss_pred EEEECCCCEE-EEEEEEEECCCCCCHHHCCC
Q ss_conf 9996799879-99997432288689655126
Q gi|254780798|r 166 KIMDSSRRYS-IIKILKYKENTVLDPKVFEI 195 (204)
Q Consensus 166 ~i~D~~G~~t-~i~f~ni~~N~~i~~~~F~f 195 (204)
++.|..|+.+ ++.|++++.|..+....+.+
T Consensus 162 ~~~d~~g~~~~~~~~~~~~~~~~~~~p~~~~ 192 (229)
T 3buu_A 162 EFYSVSGRLLKTSRYENFDNILGEXRPTRII 192 (229)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEE
T ss_pred EEECCCCCEEEEEEEEEEEEECCEEEEEEEE
T ss_conf 9981799488999988869988998768999