HHsearch results for GI: 254780798 and protein with PDBid: 3bk5_A

>3bk5_A Putative outer membrane lipoprotein-sorting protein; putative outer membrane protein domain, PSI-2; HET: MSE; 2.00A {Vibrio parahaemolyticus rimd 2210633}
Probab=97.81  E-value=0.0013  Score=38.16  Aligned_cols=167  Identities=11%  Similarity=-0.021  Sum_probs=93.8

Q ss_pred             CCCCHHHHHHHHHHHCCCEEEEEEEE--E-ECCCEEEEEEEEE---CC---CEEEEEECCCCE---EEEEE-----ECEE
Q ss_conf             43101799999986126706999999--6-1895599999996---69---869999716641---57775-----1205
Q gi|254780798|r   30 ITKDQSVKKAIEHFLSIQTMQGTFLQ--E-DAGYVMKGEFFMA---RP---SKFYFKYSSPSS---VSLIS-----DGSN   92 (204)
Q Consensus        30 ~~~~~~~~~i~~~l~~~~t~~a~F~Q--~-~~~~~~~G~~~~k---kP---~k~rw~y~~P~~---~~iv~-----~g~~   92 (204)
                      ....++++++.+.-.+.++.+|.-.=  + ..|...+=.+-++   .+   .+....+..|..   +.+..     .++.
T Consensus         4 ~~g~eIa~~~~~~~~g~~~~~~~~~M~l~~~~g~~~~R~~~~~~~~~~~~~~ksli~f~~P~~~kGt~~L~~~~~~~~dd   83 (237)
T 3bk5_A            4 EKGLEIAQERKARDEGWGDSIATMEMILKNAQGESSTRLMRLKSLEVEGDGDKGLTIFDQPRDVTGTAFLNHSHTIGADD   83 (237)
T ss_dssp             HHHHHHHHHHHHTTCCCCEEEEEEEEEEECCC-CCEEEEEEEEEECCTTSCCEEEEEEEESTTTTTCEEEEECCSSSCCE
T ss_pred             HHHHHHHHHHHHCCCCCCCCEEEEEEEEEECCCCEEEEEEEEEEEECCCCCCEEEEEEECCHHCCCCEEEEEECCCCCCC
T ss_conf             67999999977512487782699999999589989999999999980799837999993651105948998644689861


Q ss_pred             EEEEECCCCCCCCHHHHHHHHHHHCCHHHHH--------HHHC------CCCCCCCCCEEEEECCCCCCCCEEEEEEECC
Q ss_conf             9997133343210111111233210001212--------2210------1132235727997204666663479999369
Q gi|254780798|r   93 IAVYNAKLDTWSVYPLRYMAFSVIFSNNQHV--------IQES------IQRVESNNSFITIFFKDDFMGNMISVTFDRL  158 (204)
Q Consensus        93 l~~~d~~~~q~~~~~~~~~~~~~~~~~~~~~--------~~~~------~~~~~~~~~~~~~~~~~~~~~~~i~l~f~~~  158 (204)
                      .|.|.|.++.+-+.+...-...+........        ....      ...+.........++........+.++++.+
T Consensus        84 ~WlYlP~~~rv~RIs~s~k~~sfmGSDfsyeDl~~~~~~~~~~~l~~~~~~~g~~~~vle~~pk~~~~~Y~k~~~wIdk~  163 (237)
T 3bk5_A           84 QWLYLPALKRVKRISSRNKSGPFMGSEFAYEDLSSFEIEKYRFNHLKDEKFNGQDVFVLEQIPTDKNSGYTKQVVWLDKA  163 (237)
T ss_dssp             EEEEETTTTEEEECCGGGTTSBSTTSSCBGGGGSCCCGGGEEEEEEEEEEETTEEEEEEEEEESCTTSSEEEEEEEEETT
T ss_pred             EEEECCCCCCEEECCCCCCCCCCCCCEEEHHHHHCCCCCCCHHHHCCCCCCCCEEEEEEEEECCCCCCCEEEEEEEEECC
T ss_conf             58984778834985830146873344112134100320001122202211288069999952589877416999999977


Q ss_pred             CCEEEEEEEEECC--------------------------------CCEEEEEEEEEECCCCCCHHHCCCC
Q ss_conf             8429999999679--------------------------------9879999974322886896551268
Q gi|254780798|r  159 SYRLLNWKIMDSS--------------------------------RRYSIIKILKYKENTVLDPKVFEIP  196 (204)
Q Consensus       159 ~~~l~~~~i~D~~--------------------------------G~~t~i~f~ni~~N~~i~~~~F~f~  196 (204)
                      ++.+.+.+..|..                                |..|.+.+.++++|..|++++|.-.
T Consensus       164 ~~~p~k~e~yd~~G~l~K~~~~~~~~~~~~~~~~~~~~~m~~~~~g~~T~l~~~~i~~~~~l~d~~Ft~~  233 (237)
T 3bk5_A          164 HYRPLKVEFYDRKGALLKTLTFANYKQYLDKYWRAHTMAMTNHQTGKSTELNTSDLRFQTGLEENDFNKN  233 (237)
T ss_dssp             TCCEEEEEEEETTSCEEEEEEEEEEEEETTTEEEEEEEEEEETTTCCEEEEEEEEEEECCCCCGGGGCGG
T ss_pred             CCEEEEEEEECCCCCEEEEEEEEEEEECCCCEEEEEEEEEECCCCCCEEEEEEEEEECCCCCCHHHCCHH
T ss_conf             7679999999279969999994541320596443499999917889889999986781899894888987