HHsearch results for GI: 254780798 and protein with PDBid: 3buu_A

>3buu_A Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}
Probab=98.98  E-value=1.1e-07  Score=61.03  Aligned_cols=170  Identities=13%  Similarity=0.085  Sum_probs=109.2

Q ss_pred             HHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEE-ECCC----EEEEEEEEECCCEEEEEECCCCE---EEEEEECEEEEEE
Q ss_conf             40344431017999999861267069999996-1895----59999999669869999716641---5777512059997
Q gi|254780798|r   25 NAAYPITKDQSVKKAIEHFLSIQTMQGTFLQE-DAGY----VMKGEFFMARPSKFYFKYSSPSS---VSLISDGSNIAVY   96 (204)
Q Consensus        25 ~a~~~~~~~~~~~~i~~~l~~~~t~~a~F~Q~-~~~~----~~~G~~~~kkP~k~rw~y~~P~~---~~iv~~g~~l~~~   96 (204)
                      .|+++..++++++++.+....-.++++..+=+ ..+.    ..+=..+-+-+.+....+.+|..   +.++.+|+.+|.|
T Consensus         2 ~a~~a~ta~eIl~k~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~k~li~f~~P~~~kG~~~L~~~d~~w~Y   81 (229)
T 3buu_A            2 NAKSAVTAQSILEKADEIRFPQDSFQVNVAIRTAAPDHAEDLYRYQVLSKGNENSIVMITEPASERGQAILMKGRDLWVF   81 (229)
T ss_dssp             ----CCCHHHHHHHHHHHHSCSSCEEEEEEEEEEETTEECCCEEEEEEEETTTEEEEEEEESTTTTTCEEEEETTEEEEE
T ss_pred             CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEECCCCEEEE
T ss_conf             85234799999999987406799889999999975997469999999963993799999078202692999907761898


Q ss_pred             ECCCCCCCCHHHHHHHHHHHCCHHH---HHHHHC--------CCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEE---
Q ss_conf             1333432101111112332100012---122210--------11322357279972046666634799993698429---
Q gi|254780798|r   97 NAKLDTWSVYPLRYMAFSVIFSNNQ---HVIQES--------IQRVESNNSFITIFFKDDFMGNMISVTFDRLSYRL---  162 (204)
Q Consensus        97 d~~~~q~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l---  162 (204)
                      .|.++++-+.+..+....-+...+.   +.....        ...+.......+.++......+.+.++++.+++.+   
T Consensus        82 lP~~~rv~ris~~~~~~~~f~~~D~~~~dl~~dy~~~~~~e~~~~g~~~yvlel~pk~~~~~Y~k~~~wIdk~~~~p~k~  161 (229)
T 3buu_A           82 MPSVSQPIRLSLSQRLTGQVANGDIARANFTGDYHPQLLRNESIDDEDYYVLELTGIDRSVTYQKVLLWVNQSNFRPYKA  161 (229)
T ss_dssp             CTTCSSCEEECTTSEEETTEEHHHHHCCCSBTTEEEEEEEEEEETTEEEEEEEEEESSTTSSCSEEEEEEETTTCCEEEE
T ss_pred             CCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEE
T ss_conf             55568369955765556875433011120002334898400368884499999852788888669999999878889999


Q ss_pred             ---------------------------EEEEEEEC--CCCEEEEEEEEEECCCCCCHHHCCC
Q ss_conf             ---------------------------99999967--9987999997432288689655126
Q gi|254780798|r  163 ---------------------------LNWKIMDS--SRRYSIIKILKYKENTVLDPKVFEI  195 (204)
Q Consensus       163 ---------------------------~~~~i~D~--~G~~t~i~f~ni~~N~~i~~~~F~f  195 (204)
                                                 ..+.+.|.  .|..|.+.++++++| +++++.|.-
T Consensus       162 e~yd~~G~l~K~~~~~~~~~i~g~~~p~~~~~~~~~~~~~~T~l~~~~i~~~-~i~d~~Ft~  222 (229)
T 3buu_A          162 EFYSVSGRLLKTSRYENFDNILGEMRPTRIIMEDALKSGEVSVLDYSDMKLR-DLPDKIFTK  222 (229)
T ss_dssp             EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEESSSSCCEEEEEEEEEEEC-CCCGGGSST
T ss_pred             EEECCCCCEEEEEEEEEEEEECCEEEEEEEEEEECCCCCCEEEEEEEEEEEC-CCCHHHCCH
T ss_conf             9991799789999968539988999879999996877898899999851348-899487889