HHsearch results for GI: 254780798 and protein with PDBid: 3buu_A
>3buu_A Uncharacterized LOLA superfamily protein NE2245; PSI-2, protein structure initiative, midwest center for structural genomics; HET: MSE; 1.20A {Nitrosomonas europaea atcc 19718}
Probab=98.98 E-value=1.1e-07 Score=61.03 Aligned_cols=170 Identities=13% Similarity=0.085 Sum_probs=109.2
Q ss_pred HHCCCCCCCHHHHHHHHHHHCCCEEEEEEEEE-ECCC----EEEEEEEEECCCEEEEEECCCCE---EEEEEECEEEEEE
Q ss_conf 40344431017999999861267069999996-1895----59999999669869999716641---5777512059997
Q gi|254780798|r 25 NAAYPITKDQSVKKAIEHFLSIQTMQGTFLQE-DAGY----VMKGEFFMARPSKFYFKYSSPSS---VSLISDGSNIAVY 96 (204)
Q Consensus 25 ~a~~~~~~~~~~~~i~~~l~~~~t~~a~F~Q~-~~~~----~~~G~~~~kkP~k~rw~y~~P~~---~~iv~~g~~l~~~ 96 (204)
.|+++..++++++++.+....-.++++..+=+ ..+. ..+=..+-+-+.+....+.+|.. +.++.+|+.+|.|
T Consensus 2 ~a~~a~ta~eIl~k~d~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~kg~~k~li~f~~P~~~kG~~~L~~~d~~w~Y 81 (229)
T 3buu_A 2 NAKSAVTAQSILEKADEIRFPQDSFQVNVAIRTAAPDHAEDLYRYQVLSKGNENSIVMITEPASERGQAILMKGRDLWVF 81 (229)
T ss_dssp ----CCCHHHHHHHHHHHHSCSSCEEEEEEEEEEETTEECCCEEEEEEEETTTEEEEEEEESTTTTTCEEEEETTEEEEE
T ss_pred CCCCCCCHHHHHHHHHHHHCCCCCEEEEEEEEEECCCCCEEEEEEEEEECCCCEEEEEEECCCCCCCCEEEECCCCEEEE
T ss_conf 85234799999999987406799889999999975997469999999963993799999078202692999907761898
Q ss_pred ECCCCCCCCHHHHHHHHHHHCCHHH---HHHHHC--------CCCCCCCCCEEEEECCCCCCCCEEEEEEECCCCEE---
Q ss_conf 1333432101111112332100012---122210--------11322357279972046666634799993698429---
Q gi|254780798|r 97 NAKLDTWSVYPLRYMAFSVIFSNNQ---HVIQES--------IQRVESNNSFITIFFKDDFMGNMISVTFDRLSYRL--- 162 (204)
Q Consensus 97 d~~~~q~~~~~~~~~~~~~~~~~~~---~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l--- 162 (204)
.|.++++-+.+..+....-+...+. +..... ...+.......+.++......+.+.++++.+++.+
T Consensus 82 lP~~~rv~ris~~~~~~~~f~~~D~~~~dl~~dy~~~~~~e~~~~g~~~yvlel~pk~~~~~Y~k~~~wIdk~~~~p~k~ 161 (229)
T 3buu_A 82 MPSVSQPIRLSLSQRLTGQVANGDIARANFTGDYHPQLLRNESIDDEDYYVLELTGIDRSVTYQKVLLWVNQSNFRPYKA 161 (229)
T ss_dssp CTTCSSCEEECTTSEEETTEEHHHHHCCCSBTTEEEEEEEEEEETTEEEEEEEEEESSTTSSCSEEEEEEETTTCCEEEE
T ss_pred CCCCCCEEEECCCCCCCCCCCCCCHHHCCCCCCCEEEEEEEEEECCEEEEEEEEECCCCCCCCEEEEEEEECCCCEEEEE
T ss_conf 55568369955765556875433011120002334898400368884499999852788888669999999878889999
Q ss_pred ---------------------------EEEEEEEC--CCCEEEEEEEEEECCCCCCHHHCCC
Q ss_conf ---------------------------99999967--9987999997432288689655126
Q gi|254780798|r 163 ---------------------------LNWKIMDS--SRRYSIIKILKYKENTVLDPKVFEI 195 (204)
Q Consensus 163 ---------------------------~~~~i~D~--~G~~t~i~f~ni~~N~~i~~~~F~f 195 (204)
..+.+.|. .|..|.+.++++++| +++++.|.-
T Consensus 162 e~yd~~G~l~K~~~~~~~~~i~g~~~p~~~~~~~~~~~~~~T~l~~~~i~~~-~i~d~~Ft~ 222 (229)
T 3buu_A 162 EFYSVSGRLLKTSRYENFDNILGEMRPTRIIMEDALKSGEVSVLDYSDMKLR-DLPDKIFTK 222 (229)
T ss_dssp EEECTTSCEEEEEEEEEEEEETTEEEEEEEEEEESSSSCCEEEEEEEEEEEC-CCCGGGSST
T ss_pred EEECCCCCEEEEEEEEEEEEECCEEEEEEEEEEECCCCCCEEEEEEEEEEEC-CCCHHHCCH
T ss_conf 9991799789999968539988999879999996877898899999851348-899487889