HHsearch results for GI: 254780798 and protein with PDBid: 3m4w_A
>3m4w_A Sigma-E factor regulatory protein RSEB; RSEA, RSEB, RSEP, stress response, sigma factor, periplasm, membrane, transmembrane; 2.30A {Escherichia coli} PDB: 2p4b_A 2v43_A 2v42_A
Probab=97.66 E-value=0.0022 Score=36.82 Aligned_cols=165 Identities=10% Similarity=0.047 Sum_probs=102.2
Q ss_pred CCCHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEEEE-CC--CEEEEEECCCCEEEEEEECEEEEEEECCCCCCCCHH
Q ss_conf 310179999998612670699999961895599999996-69--869999716641577751205999713334321011
Q gi|254780798|r 31 TKDQSVKKAIEHFLSIQTMQGTFLQEDAGYVMKGEFFMA-RP--SKFYFKYSSPSSVSLISDGSNIAVYNAKLDTWSVYP 107 (204)
Q Consensus 31 ~~~~~~~~i~~~l~~~~t~~a~F~Q~~~~~~~~G~~~~k-kP--~k~rw~y~~P~~~~iv~~g~~l~~~d~~~~q~~~~~ 107 (204)
++...++++.+..++ .++++.|+....+...+=.+.=. .. ..-|.+.-.-.+..++-.|+.++.+.|+.+.+....
T Consensus 3 ~a~~lL~~m~~A~~~-lnY~g~fv~~~~~~~~s~ri~H~~~~~~e~erl~~LdG~~revir~~~~v~~~~p~~~~~~~~~ 81 (295)
T 3m4w_A 3 ASGALLQQMNLASQS-LNYELSFISINKQGVESLRYRHARLDNRPLAQLLQMDGPRREVVQRGNEISYFEPGLEPFTLNG 81 (295)
T ss_dssp HHHHHHHHHHHHHHH-SEEEEEEEEEETTEEEEEEEEEEECSSSEEEEEEECSSSCCEEEEETTEEEEECTTSCCEEEEC
T ss_pred CHHHHHHHHHHHHHH-CCEEEEEEEECCCCEEEEEEEEEEECCEEEEEEEECCCCCEEEEEECCEEEEEECCCCCEEEEC
T ss_conf 489999999988875-7834999999099077899999980996999999559994289997999999907985278845
Q ss_pred H--HHHHHHHHCCHHHHHHHHCCC------CCCCCCCEEEEECCCCCCCCEEEEEEECCCCEEEEEEEEECCCCEE-EEE
Q ss_conf 1--111233210001212221011------3223572799720466666347999936984299999996799879-999
Q gi|254780798|r 108 L--RYMAFSVIFSNNQHVIQESIQ------RVESNNSFITIFFKDDFMGNMISVTFDRLSYRLLNWKIMDSSRRYS-IIK 178 (204)
Q Consensus 108 ~--~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~i~l~f~~~~~~l~~~~i~D~~G~~t-~i~ 178 (204)
- ......++..........+.. ..-..........+.+..-....+|+|.++..+.+.++.|..|+.. .+.
T Consensus 82 ~~~~~~fp~~l~~~~~~l~~~Y~~~~~G~~RVAGR~a~vi~l~PkD~~Ry~y~lWiD~etgLpLk~~~~d~~g~vlEq~~ 161 (295)
T 3m4w_A 82 DYIVDSLPSLIYTDFKRLSPYYDFISVGRTRIADRLCEVIRVVARDGTRYSYIVWMDTESKLPMRVDLLDRDGETLEQFR 161 (295)
T ss_dssp SSCTTSSCGGGGCCHHHHTTTEEEEEEEEEEETTEEEEEEEEEETTSCSCEEEEEEETTTCCEEEEEEECTTSCEEEEEE
T ss_pred CCCCCCCCCCCCCCHHHHHHCEEEEECCCCEECCCEEEEEEEEECCCCEEEEEEEEECCCCCEEEEEECCCCCCEEEEEE
T ss_conf 54556673114547556741544898688579993889999985799768899999878896887755047997999999
Q ss_pred EEEEECCCCCCHHHCCCC
Q ss_conf 974322886896551268
Q gi|254780798|r 179 ILKYKENTVLDPKVFEIP 196 (204)
Q Consensus 179 f~ni~~N~~i~~~~F~f~ 196 (204)
|+++..+..+++..|.++
T Consensus 162 ft~l~~~~~~~~~~~~~~ 179 (295)
T 3m4w_A 162 VIAFNVNQDISSSMQTLA 179 (295)
T ss_dssp EEEEEEESSCCHHHHHHH
T ss_pred EEEEEECCCCCHHHHHCC
T ss_conf 999882788665564021