HHsearch alignment for GI: 254780799 and conserved domain: COG2804

>COG2804 PulE Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=94.17  E-value=0.043  Score=35.34  Aligned_cols=112  Identities=29%  Similarity=0.393  Sum_probs=60.2

Q ss_pred             HHHHHHHHH-HHHHHHHHCCCCCC-CCCCCCEEEEE---ECCCCCCEEEEHHHCCCHHHHHCCCCCHH-HCCCCCCCCEE
Q ss_conf             999997889-99988630012100-03886125553---02456623873423072134302210002-10456666667
Q gi|254780799|r  374 SSRIIGLSD-DIARSMSAISARVA-VIPRRNAIGIE---LPNDIRETVMLRDLIVSRVFEKNQCDLAI-NLGKSIEGKPI  447 (806)
Q Consensus       374 vSKI~nLad-DIA~aLsa~svRIa-pIPGK~~VGIE---iPN~~r~~V~lreil~s~~f~~s~~~L~i-aLGKdI~G~pv  447 (806)
T Consensus       177 vsriK~ma~LDIaErR~PQdGr~~~~~~~~~-vd~RvStlP~~~GEkvVlRil~~~~------~~l~l~~Lg~~~~~~~~  249 (500)
T COG2804         177 VSRLKVMAGLDIAERRLPQDGRIRLKLNGRK-VDFRVSTLPTFYGEKVVLRILDKDQ------VILDLEKLGMSPFQLAR  249 (500)
T ss_pred             HHHHHHHHCCCHHHCCCCCCCEEEEEECCEE-EEEEEECCCCCCCCEEEEEEECCCC------CCCCHHHHCCCHHHHHH
T ss_conf             9999988437525201787762899808835-8899955788778578999833312------46888783899889999


Q ss_pred             EEECCCCCE--EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEE-ECCCH
Q ss_conf             854100202--35530477406799999999999829957847888-52310
Q gi|254780799|r  448 IADLARMPH--LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIM-IDPKM  496 (806)
Q Consensus       448 v~DLakMPH--LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklil-iDPK~  496 (806)
T Consensus       250 ~~~~~~~p~GliLvTGPTGSGKTTTLY~~L~~l---n~~~~n-I~TiEDPVE  297 (500)
T COG2804         250 LLRLLNRPQGLILVTGPTGSGKTTTLYAALSEL---NTPERN-IITIEDPVE  297 (500)
T ss_pred             HHHHHHCCCEEEEEECCCCCCHHHHHHHHHHHH---CCCCCE-EEEEECCEE
T ss_conf             999972897089996899998899999999986---278850-898407804