HHsearch alignment for GI: 254780799 and conserved domain: COG2805

>COG2805 PilT Tfp pilus assembly protein, pilus retraction ATPase PilT [Cell motility and secretion / Intracellular trafficking and secretion].
Probab=93.66  E-value=0.048  Score=34.91  Aligned_cols=114  Identities=32%  Similarity=0.451  Sum_probs=65.8

Q ss_pred             EEEECCCCC--EEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHHHHHHCCCCHHHHCCCCCCHHHHHHHH-
Q ss_conf             785410020--23553047740679999999999982995784788852310011102770343122334304566899-
Q gi|254780799|r  447 IIADLARMP--HLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKMLELSVYDGIPNLLTPVVTNPQKAVTVL-  523 (806)
Q Consensus       447 vv~DLakMP--HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~vEls~Y~~iPHLl~pVvTd~~kA~~aL-  523 (806)
T Consensus       116 i~~~~~~~~~GLILVTGpTGSGKSTTlAamId~iN-~~~~~---------------------HIlT--IEDPIE~vh~sk  171 (353)
T COG2805         116 IVRELAESPRGLILVTGPTGSGKSTTLAAMIDYIN-KHKAK---------------------HILT--IEDPIEYVHESK  171 (353)
T ss_pred             HHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHH-CCCCC---------------------CEEE--ECCCHHHHHCCH
T ss_conf             99999828796699867999967879999999984-14775---------------------1687--237468650432


Q ss_pred             HHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHH
Q ss_conf             99999999999999870899689999999988744786677544677654543222332232346986877634468888
Q gi|254780799|r  524 KWLVCEMEERYQKMSKIGVRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDEMADLM  603 (806)
Q Consensus       524 ~w~V~EMe~RY~l~a~~~vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDElaDlm  603 (806)
T Consensus       172 kslI~QREv---------G~dT~sF~~aLraALRe------------D------------P-------DVIlvGEmRD~-  210 (353)
T COG2805         172 KSLINQREV---------GRDTLSFANALRAALRE------------D------------P-------DVILVGEMRDL-  210 (353)
T ss_pred             HHHHHHHHH---------CCCHHHHHHHHHHHHHC------------C------------C-------CEEEEECCCCH-
T ss_conf             766668774---------54278899999998602------------9------------9-------97998213469-


Q ss_pred             HHCCCHHHHHHHHHHHHHHHCCEEEEEEECCC
Q ss_conf             73210058899999986641423799996577
Q gi|254780799|r  604 MVARKDIESAVQRLAQMARASGIHVIMATQRP  635 (806)
Q Consensus       604 m~~~~~ve~~i~rlaq~ara~GiHli~aTqrP  635 (806)
T Consensus       211 -------E--Ti~~ALtAAETG-HLV~~TLHT  232 (353)
T COG2805         211 -------E--TIRLALTAAETG-HLVFGTLHT  232 (353)
T ss_pred             -------H--HHHHHHHHHHCC-CEEEEECCC
T ss_conf             -------9--999999898608-877774023