HHsearch alignment for GI: 254780799 and conserved domain: PRK09112
>PRK09112 DNA polymerase III subunit delta'; Validated.
Probab=90.58 E-value=0.36 Score=28.38 Aligned_cols=133 Identities=21% Similarity=0.326 Sum_probs=70.3
Q ss_pred CCCCE-EEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEE--ECCC-----HHHHHHCCCCHHHHCCCCCCHHHHHHHH
Q ss_conf 00202-35530477406799999999999829957847888--5231-----0011102770343122334304566899
Q gi|254780799|r 452 ARMPH-LLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIM--IDPK-----MLELSVYDGIPNLLTPVVTNPQKAVTVL 523 (806)
Q Consensus 452 akMPH-LLIAGtTGSGKSV~iN~iI~SlLyk~~P~evklil--iDPK-----~vEls~Y~~iPHLl~pVvTd~~kA~~aL 523 (806)
T Consensus 42 gRl~HA~Lf~GP~GiGKaTlA~~~A~~Ll~~~~~~~~~~~~~~pd~~~~~~r~i~~g~hpdl~~i~r~------------ 109 (352)
T PRK09112 42 GRLHHALLFEGPEGIGKATLAFHLANHILSHPDPNEAPETLADPDPASPLWRQIAQGAHPNLLHLTRP------------ 109 (352)
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHCCCCCCEEEEECC------------
T ss_conf 99652465358998089999999999986699866686556788878778999974899995655343------------
Q ss_pred HHHHHHHHHHHHHHHHCC---CCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHH
Q ss_conf 999999999999998708---99689999999988744786677544677654543222332232346986877634468
Q gi|254780799|r 524 KWLVCEMEERYQKMSKIG---VRNIDGFNLKVAQYHNTGKKFNRTVQTGFDRKTGEAIYETEHFDFQHMPYIVVVIDEMA 600 (806)
Q Consensus 524 ~w~V~EMe~RY~l~a~~~---vRni~~yN~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lp~ivviiDEla 600 (806)
T Consensus 110 ---~d~k~~~~~--~~I~vd~iR~l~~~~~~-------------------~~~--------------~~~~kv~Iid~a- 150 (352)
T PRK09112 110 ---FDEKTGKFK--TAITVDEIRRVTHFLSQ-------------------TSG--------------DGNWRIVIIDPA- 150 (352)
T ss_pred ---CCHHHHHHH--CCCCHHHHHHHHHHHCC-------------------CCC--------------CCCEEEEEECCH-
T ss_conf ---220214543--35777999999998454-------------------886--------------688069998187-
Q ss_pred HHHHHCC-----CHHHHHHHHHHHHHHHCCEEEEEEECCCCCCCCCHHHHH
Q ss_conf 8887321-----005889999998664142379999657775355435541
Q gi|254780799|r 601 DLMMVAR-----KDIESAVQRLAQMARASGIHVIMATQRPSVDVITGTIKA 646 (806)
Q Consensus 601 Dlmm~~~-----~~ve~~i~rlaq~ara~GiHli~aTqrPsvdvitg~ika 646 (806)
T Consensus 151 d~m~~~aaNALLK~LEEPp---------~~~~fiLit~~~~--~ll~TI~S 190 (352)
T PRK09112 151 DDMNRNAANAILKTLEEPP---------ARALFILISHSSG--RLLPTIRS 190 (352)
T ss_pred HHHHHHHHHHHHHHHHCCC---------CCEEEEEEECCHH--HCHHHHHH
T ss_conf 8746999999999853489---------8748998869977--77689997