HHsearch alignment for GI: 254780799 and conserved domain: PRK13873

>PRK13873 conjugal transfer ATPase TrbE; Provisional.
Probab=96.64  E-value=0.0024  Score=44.67  Aligned_cols=305  Identities=19%  Similarity=0.317  Sum_probs=148.8

Q ss_pred             CCHHHCCCCCCCCEEEEECC--CCCEEEEEECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCH-HHH------HHCC
Q ss_conf             00021045666666785410--02023553047740679999999999982995784788852310-011------1027
Q gi|254780799|r  433 DLAINLGKSIEGKPIIADLA--RMPHLLIAGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKM-LEL------SVYD  503 (806)
Q Consensus       433 ~L~iaLGKdI~G~pvv~DLa--kMPHLLIAGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~-vEl------s~Y~  503 (806)
T Consensus       418 ~p~l~~~~T~g~tPf~fN~H~gdvGHtlI~GpTGsGKTvll~~l~~q-~~ry~~~--~vf~FDkd~s~~i~~~a~GG~y~  494 (815)
T PRK13873        418 GPPLLYGRTEGSTPFRLSLHVGDVGHTLVVGPTGAGKSVLLALMALQ-FRRYPGS--QVFAFDFGGSIRAAALAMGGDWH  494 (815)
T ss_pred             CCEEEEEECCCCCCEEEECCCCCCCCEEEECCCCCCHHHHHHHHHHH-HHHCCCC--CEEEEECCCCHHHHHHHHCCEEE
T ss_conf             88058863489996687664688764389788999899999999999-8644898--48999789878999998299876


Q ss_pred             CC----------HHHHCCC--CCCHHHHHHHHHHHHHHHHHH---------------HHHHHH--CCCCCHHHHHHHH--
Q ss_conf             70----------3431223--343045668999999999999---------------999987--0899689999999--
Q gi|254780799|r  504 GI----------PNLLTPV--VTNPQKAVTVLKWLVCEMEER---------------YQKMSK--IGVRNIDGFNLKV--  552 (806)
Q Consensus       504 ~i----------PHLl~pV--vTd~~kA~~aL~w~V~EMe~R---------------Y~l~a~--~~vRni~~yN~k~--  552 (806)
T Consensus       495 ~lg~~~~~~~~~~~~f~Pl~~~d~~~~r~~~~~wi~~ll~~~g~~~tp~~~~~i~~Av~~l~~~~~~~Rtls~l~~~l~~  574 (815)
T PRK13873        495 DLGGGLSDGADGSVALQPLARIDDPAERAWAAEWIAAILAREGVAVTPEVKEHIWSALTSLASAPVEERTLTGLSVLLQS  574 (815)
T ss_pred             ECCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCHHHCCHHHHHHHHCC
T ss_conf             03565556789987779876889978889999999999961798889899999999999985198521739999988188


Q ss_pred             ---HHHH---HCCCCCCCCCCCCCCCCCCCC------CCCCCCC-------------------CCCCCCEEEEEHHHHHH
Q ss_conf             ---9887---447866775446776545432------2233223-------------------23469868776344688
Q gi|254780799|r  553 ---AQYH---NTGKKFNRTVQTGFDRKTGEA------IYETEHF-------------------DFQHMPYIVVVIDEMAD  601 (806)
Q Consensus       553 ---~~~~---~~~~~~~~~~~~~~~~~~~~~------~~~~~~~-------------------~~~~lp~ivviiDElaD  601 (806)
T Consensus       575 ~~L~~~L~~w~~~G~~G----~lfD~~~D~l~~~~~~~Fe~~~l~~~~~~~pvl~YLf~rie~~lDGrp-tli~iDEaW~  649 (815)
T PRK13873        575 NALKQALRPYCLGGPYG----RLLDAEHERLGSADVQAFETEGLMGTAAAPAVLSYLFHRIEDRFDGRP-TLLILDEGWL  649 (815)
T ss_pred             CHHHHHHHHHHCCCCCE----ECCCCCCCCCCCCCCEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCC-EEEEHHHHHH
T ss_conf             14999999983789845----426886567776773699873037865178999999999999758996-6997586587


Q ss_pred             HHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCCCCC----CCHHHHHCCCCEEEEEECCCC--CCHHHCCCCCHHHHC
Q ss_conf             88732100588999999866414237999965777535----543554110251587645866--421233886457865
Q gi|254780799|r  602 LMMVARKDIESAVQRLAQMARASGIHVIMATQRPSVDV----ITGTIKANFPTRISFQVSSKI--DSRTILGEQGAEQLL  675 (806)
Q Consensus       602 lmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPsvdv----itg~ikan~p~riaf~v~s~~--dSrtild~~gae~Ll  675 (806)
T Consensus       650 ~L--~~~~F~~~i~~wLkT~RK~N~~vv~aTQS~~-di~~S~I~~aiie~c~T~IfLPNp~A~~~~~~~~Y---------  717 (815)
T PRK13873        650 AL--DDPVFAAQLREWLKTLRKKNASVIFATQSLA-DIDDSAIAPAIIESCPTRIFLPNERAIEPQIAAIY---------  717 (815)
T ss_pred             HH--CCHHHHHHHHHHHHHHHHCCCEEEEECCCHH-HHHCCCHHHHHHHHCCEEEECCCCCCCCCHHHHHH---------
T ss_conf             72--8989999999999999870877999778889-98649668999986885698778222770068999---------


Q ss_pred             CCCCEEEECCCCCEEEEEECCCCHHHHHHHHHHHHHCCCCCCC-CCCCC------CCCCCCCCCCCCCCCCCHHHHHHHH
Q ss_conf             8875477368983258883348988999999999712897421-10012------4556667788888777703899999
Q gi|254780799|r  676 GQGDMLYMTGGGRVQRIHGPFVSDIEVEKVVSHLKTQGEAKYI-DIKDK------ILLNEEMRFSENSSVADDLYKQAVD  748 (806)
Q Consensus       676 g~gdml~~~~~~~~~r~~g~~v~~~ev~~v~~~~~~q~~~~y~-~~~~~------~~~~~~~~~~~~~~~~d~l~~~a~~  748 (806)
T Consensus       718 -----------------~~fGLn~rqieiIa~a---~pKRdYy~~s~~g~Rlf~L~L~~~~la~~~-~s~~~d~-~~~~~  775 (815)
T PRK13873        718 -----------------RRFGLNDRQIEILARA---TPKRDYYCQSRRGNRLFELGLGPVALAFCA-ASSKADQ-ALIDR  775 (815)
T ss_pred             -----------------HHCCCCHHHHHHHHHC---CCCCEEEEECCCCCEEEECCCCHHHHHEEE-CCCHHHH-HHHHH
T ss_conf             -----------------8749999999999733---746635898799877897389704210000-3888899-99999


Q ss_pred             HHHHCCCE--EEEHHHHHHCCCHHHHHHHHHHHHHC
Q ss_conf             99965985--00014222001177899999999977
Q gi|254780799|r  749 IVLRDNKA--SISYIQRRLGIGYNRAASIIENMEEK  782 (806)
Q Consensus       749 ~v~~~~~~--s~s~lqr~~~igy~raar~~~~~e~~  782 (806)
T Consensus       776 l~~~~g~~~~~~~wl~~~---g~~~a~~~~~~~~~~  808 (815)
T PRK13873        776 VLAEHGRDGFAAAWLRHR---GLDWAADLLPDLTNL  808 (815)
T ss_pred             HHHHHCCCHHHHHHHHHC---CCCHHHHHHHHHHHC
T ss_conf             999819101599999965---983688876543111