HHsearch alignment for GI: 254780799 and conserved domain: PRK13891
>PRK13891 conjugal transfer protein TrbE; Provisional.
Probab=96.30 E-value=0.0053 Score=42.09 Aligned_cols=303 Identities=15% Similarity=0.226 Sum_probs=143.9
Q ss_pred CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC-------CCC-----
Q ss_conf 32566545789999997424863289984104424444432147863999997889999886300-------121-----
Q gi|254780799|r 327 FSPKVMQNNACTLKSVLSDFGIQGEIVNVRPGPVITLYELEPAPGIKSSRIIGLSDDIARSMSAI-------SAR----- 394 (806)
Q Consensus 327 ~s~eeL~~nA~lLE~tL~dFGVe~~Vv~v~pGPVVTrYEi~PApGVKvSKI~nLadDIA~aLsa~-------svR----- 394 (806)
T Consensus 347 ~d~dA~~~-~~d~d~Al~el~sg-~v~~Gy~t~tv~v~~~~~~------~l~~~~~~v~~~l~~~GF~~~~Et~n~~~A~ 418 (852)
T PRK13891 347 VNQDAASM-VGDAEAAIAEVNSG-LVAAGYYTSVVVLMDEDRE------RLEASALLVEKAINRLAFAARIETINTMDAY 418 (852)
T ss_pred CCHHHHHH-HHHHHHHHHHHCCC-CEEEEEEEEEEEEECCCHH------HHHHHHHHHHHHHHHCCCEEEEEHHCCHHHH
T ss_conf 46489999-99999999986089-7526888889999789999------9999999999999868967986110239999
Q ss_pred CCCCCCCCEEEEEECCCCCCEE---------EEHHHCCCHHHHH----CCCCCHHHCCCCCCCCEEEEECC--CCCEEEE
Q ss_conf 0003886125553024566238---------7342307213430----22100021045666666785410--0202355
Q gi|254780799|r 395 VAVIPRRNAIGIELPNDIRETV---------MLRDLIVSRVFEK----NQCDLAINLGKSIEGKPIIADLA--RMPHLLI 459 (806)
Q Consensus 395 IapIPGK~~VGIEiPN~~r~~V---------~lreil~s~~f~~----s~~~L~iaLGKdI~G~pvv~DLa--kMPHLLI 459 (806)
T Consensus 419 lgsLPGn~~~-----nvR~~~isT~NlA~l~pl~~vw~G~~~~p~~~~~~~~pal~~~~T~g~tPf~fN~Hv~DvGHTlI 493 (852)
T PRK13891 419 LGSLPGHGVE-----NVRRPLINTMNLADLLPTSSIWTGSATAPCPMYPPLSPALMHCVTVGATPFRLNLHVRDLGHTFM 493 (852)
T ss_pred HHCCCCCCCC-----CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCEEE
T ss_conf 8619997667-----75636666477775641034567866798866899987418874489984478545688664078
Q ss_pred EECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH--------HH------HHCCCC-----HHHHCC--CCCCHHH
Q ss_conf 30477406799999999999829957847888523100--------11------102770-----343122--3343045
Q gi|254780799|r 460 AGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML--------EL------SVYDGI-----PNLLTP--VVTNPQK 518 (806)
Q Consensus 460 AGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v--------El------s~Y~~i-----PHLl~p--VvTd~~k 518 (806)
T Consensus 494 iGpTGaGKTvll~fL~aQ~~-rY~~~~--vf~FDK~~S~~~~~~g~~~~~~a~GG~~~~l~~~~~~~gfnPL~~~dt~~~ 570 (852)
T PRK13891 494 FGPTGAGKSTHLGIIAAQLR-RYAGMS--IYAFDKGMSMYPLAAGIRAATKGKSGLHFTVAADDDRLAFCPLQFLETKGD 570 (852)
T ss_pred ECCCCCCHHHHHHHHHHHHH-HCCCCC--EEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHH
T ss_conf 78999988999999999974-418981--898789852343441246889853981763068999878687868997145
Q ss_pred HHHHHHHHHH------------HHHHHH---HHHHHCCCCCHHHHHHHH-----HHHHH---CCCCCCCCCCCCCCCCCC
Q ss_conf 6689999999------------999999---999870899689999999-----98874---478667754467765454
Q gi|254780799|r 519 AVTVLKWLVC------------EMEERY---QKMSKIGVRNIDGFNLKV-----AQYHN---TGKKFNRTVQTGFDRKTG 575 (806)
Q Consensus 519 A~~aL~w~V~------------EMe~RY---~l~a~~~vRni~~yN~k~-----~~~~~---~~~~~~~~~~~~~~~~~~ 575 (806)
T Consensus 571 r~~~~~wl~~ll~~~g~~~tp~~~~~I~~Av~sl~~~~~rtLs~f~~~lq~~~l~~aL~~w~~~G~~----G~lfDn~~D 646 (852)
T PRK13891 571 RAWAMEWIDTILALNGVNTTPAQRNEIGNAIMSMHASGARTLSEFSVTIQDEAIREAIKQYTVDGSM----GHLLDAEED 646 (852)
T ss_pred HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC----EECCCCCCC
T ss_conf 7999999999997289889989999999999987616460799998763988899999998469980----603788766
Q ss_pred CC------CCCCCCC---------------------CCCCCCEEEEEHHHHHHHHHHCCCH-HHHHHHHHHHHHHHCCEE
Q ss_conf 32------2233223---------------------2346986877634468888732100-588999999866414237
Q gi|254780799|r 576 EA------IYETEHF---------------------DFQHMPYIVVVIDEMADLMMVARKD-IESAVQRLAQMARASGIH 627 (806)
Q Consensus 576 ~~------~~~~~~~---------------------~~~~lp~ivviiDElaDlmm~~~~~-ve~~i~rlaq~ara~GiH 627 (806)
T Consensus 647 ~l~~s~~~~Fe~~~l~~~~~~~~~Pvl~YLFhRIe~~lDGrp-tli~lDEaW~~L---~dp~F~~~i~~wLKTlRKkN~~ 722 (852)
T PRK13891 647 GLSLSDFTVFEIEELMNLGEKFALPVLLYLFRRIERALKGQP-SVIILDEAWLML---GHPAFRAKIREWLKVLRKANCL 722 (852)
T ss_pred CCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC-EEEEEHHHHHHH---CCHHHHHHHHHHHHHHHHCCCE
T ss_conf 767676458825013026815589999999999998736992-699952367761---8999999999999999871847
Q ss_pred EEEEECCCCCCCC----CHHHHHCCCCEEEE
Q ss_conf 9999657775355----43554110251587
Q gi|254780799|r 628 VIMATQRPSVDVI----TGTIKANFPTRISF 654 (806)
Q Consensus 628 li~aTqrPsvdvi----tg~ikan~p~riaf 654 (806)
T Consensus 723 VvfATQSl~-Di~~S~I~~aiiEqc~T~IfL 752 (852)
T PRK13891 723 VLMATQSLS-DAANSGILDVIVESTATKIFL 752 (852)
T ss_pred EEEECCCHH-HHHCCCHHHHHHHHCCEEEEC
T ss_conf 999768888-985385689999858856876