HHsearch alignment for GI: 254780799 and conserved domain: PRK13891

>PRK13891 conjugal transfer protein TrbE; Provisional.
Probab=96.30  E-value=0.0053  Score=42.09  Aligned_cols=303  Identities=15%  Similarity=0.226  Sum_probs=143.9

Q ss_pred             CCHHHHHHHHHHHHHHHHHCCCCEEEEEEEECCEEEEEEEEECCCCCHHHHHHHHHHHHHHHHHC-------CCC-----
Q ss_conf             32566545789999997424863289984104424444432147863999997889999886300-------121-----
Q gi|254780799|r  327 FSPKVMQNNACTLKSVLSDFGIQGEIVNVRPGPVITLYELEPAPGIKSSRIIGLSDDIARSMSAI-------SAR-----  394 (806)
Q Consensus       327 ~s~eeL~~nA~lLE~tL~dFGVe~~Vv~v~pGPVVTrYEi~PApGVKvSKI~nLadDIA~aLsa~-------svR-----  394 (806)
T Consensus       347 ~d~dA~~~-~~d~d~Al~el~sg-~v~~Gy~t~tv~v~~~~~~------~l~~~~~~v~~~l~~~GF~~~~Et~n~~~A~  418 (852)
T PRK13891        347 VNQDAASM-VGDAEAAIAEVNSG-LVAAGYYTSVVVLMDEDRE------RLEASALLVEKAINRLAFAARIETINTMDAY  418 (852)
T ss_pred             CCHHHHHH-HHHHHHHHHHHCCC-CEEEEEEEEEEEEECCCHH------HHHHHHHHHHHHHHHCCCEEEEEHHCCHHHH
T ss_conf             46489999-99999999986089-7526888889999789999------9999999999999868967986110239999


Q ss_pred             CCCCCCCCEEEEEECCCCCCEE---------EEHHHCCCHHHHH----CCCCCHHHCCCCCCCCEEEEECC--CCCEEEE
Q ss_conf             0003886125553024566238---------7342307213430----22100021045666666785410--0202355
Q gi|254780799|r  395 VAVIPRRNAIGIELPNDIRETV---------MLRDLIVSRVFEK----NQCDLAINLGKSIEGKPIIADLA--RMPHLLI  459 (806)
Q Consensus       395 IapIPGK~~VGIEiPN~~r~~V---------~lreil~s~~f~~----s~~~L~iaLGKdI~G~pvv~DLa--kMPHLLI  459 (806)
T Consensus       419 lgsLPGn~~~-----nvR~~~isT~NlA~l~pl~~vw~G~~~~p~~~~~~~~pal~~~~T~g~tPf~fN~Hv~DvGHTlI  493 (852)
T PRK13891        419 LGSLPGHGVE-----NVRRPLINTMNLADLLPTSSIWTGSATAPCPMYPPLSPALMHCVTVGATPFRLNLHVRDLGHTFM  493 (852)
T ss_pred             HHCCCCCCCC-----CCCCCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEEECCCCCCCCEEE
T ss_conf             8619997667-----75636666477775641034567866798866899987418874489984478545688664078


Q ss_pred             EECCCCHHHHHHHHHHHHHHHHCCHHHEEEEEECCCHH--------HH------HHCCCC-----HHHHCC--CCCCHHH
Q ss_conf             30477406799999999999829957847888523100--------11------102770-----343122--3343045
Q gi|254780799|r  460 AGTTGSGKSVAINTMILSLLYRMTPAQCRLIMIDPKML--------EL------SVYDGI-----PNLLTP--VVTNPQK  518 (806)
Q Consensus       460 AGtTGSGKSV~iN~iI~SlLyk~~P~evkliliDPK~v--------El------s~Y~~i-----PHLl~p--VvTd~~k  518 (806)
T Consensus       494 iGpTGaGKTvll~fL~aQ~~-rY~~~~--vf~FDK~~S~~~~~~g~~~~~~a~GG~~~~l~~~~~~~gfnPL~~~dt~~~  570 (852)
T PRK13891        494 FGPTGAGKSTHLGIIAAQLR-RYAGMS--IYAFDKGMSMYPLAAGIRAATKGKSGLHFTVAADDDRLAFCPLQFLETKGD  570 (852)
T ss_pred             ECCCCCCHHHHHHHHHHHHH-HCCCCC--EEEECCCCCHHHHHHHHHHHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHH
T ss_conf             78999988999999999974-418981--898789852343441246889853981763068999878687868997145


Q ss_pred             HHHHHHHHHH------------HHHHHH---HHHHHCCCCCHHHHHHHH-----HHHHH---CCCCCCCCCCCCCCCCCC
Q ss_conf             6689999999------------999999---999870899689999999-----98874---478667754467765454
Q gi|254780799|r  519 AVTVLKWLVC------------EMEERY---QKMSKIGVRNIDGFNLKV-----AQYHN---TGKKFNRTVQTGFDRKTG  575 (806)
Q Consensus       519 A~~aL~w~V~------------EMe~RY---~l~a~~~vRni~~yN~k~-----~~~~~---~~~~~~~~~~~~~~~~~~  575 (806)
T Consensus       571 r~~~~~wl~~ll~~~g~~~tp~~~~~I~~Av~sl~~~~~rtLs~f~~~lq~~~l~~aL~~w~~~G~~----G~lfDn~~D  646 (852)
T PRK13891        571 RAWAMEWIDTILALNGVNTTPAQRNEIGNAIMSMHASGARTLSEFSVTIQDEAIREAIKQYTVDGSM----GHLLDAEED  646 (852)
T ss_pred             HHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCCHHHHHHHHHHHCCCCC----EECCCCCCC
T ss_conf             7999999999997289889989999999999987616460799998763988899999998469980----603788766


Q ss_pred             CC------CCCCCCC---------------------CCCCCCEEEEEHHHHHHHHHHCCCH-HHHHHHHHHHHHHHCCEE
Q ss_conf             32------2233223---------------------2346986877634468888732100-588999999866414237
Q gi|254780799|r  576 EA------IYETEHF---------------------DFQHMPYIVVVIDEMADLMMVARKD-IESAVQRLAQMARASGIH  627 (806)
Q Consensus       576 ~~------~~~~~~~---------------------~~~~lp~ivviiDElaDlmm~~~~~-ve~~i~rlaq~ara~GiH  627 (806)
T Consensus       647 ~l~~s~~~~Fe~~~l~~~~~~~~~Pvl~YLFhRIe~~lDGrp-tli~lDEaW~~L---~dp~F~~~i~~wLKTlRKkN~~  722 (852)
T PRK13891        647 GLSLSDFTVFEIEELMNLGEKFALPVLLYLFRRIERALKGQP-SVIILDEAWLML---GHPAFRAKIREWLKVLRKANCL  722 (852)
T ss_pred             CCCCCCCEEEECHHHCCCCCHHHHHHHHHHHHHHHHHHCCCC-EEEEEHHHHHHH---CCHHHHHHHHHHHHHHHHCCCE
T ss_conf             767676458825013026815589999999999998736992-699952367761---8999999999999999871847


Q ss_pred             EEEEECCCCCCCC----CHHHHHCCCCEEEE
Q ss_conf             9999657775355----43554110251587
Q gi|254780799|r  628 VIMATQRPSVDVI----TGTIKANFPTRISF  654 (806)
Q Consensus       628 li~aTqrPsvdvi----tg~ikan~p~riaf  654 (806)
T Consensus       723 VvfATQSl~-Di~~S~I~~aiiEqc~T~IfL  752 (852)
T PRK13891        723 VLMATQSLS-DAANSGILDVIVESTATKIFL  752 (852)
T ss_pred             EEEECCCHH-HHHCCCHHHHHHHHCCEEEEC
T ss_conf             999768888-985385689999858856876