HHsearch alignment for GI: 254780799 and conserved domain: TIGR01667
>TIGR01667 YCCS_YHJK integral membrane protein, YccS/YhfK family; InterPro: IPR010020 This entry identifies a clade of sequences from gamma and beta proteobacteria. These proteins are more than 700 amino acids long and many have been annotated as putative membrane proteins. The gene from Salmonella has been annotated as a putative efflux transporter. The gene from Escherichia coli has been annotated as yccS. The YccS hypothetical equivalog is found in beta and gamma proteobacteria, while the smaller YhfK group is only found in E. coli, Salmonella and Yersinia. .
Probab=92.01 E-value=1.1 Score=24.84 Aligned_cols=69 Identities=12% Similarity=0.036 Sum_probs=41.0
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCC
Q ss_conf 899999999999999999999999999998276523678999999999999999999850444322333
Q gi|254780799|r 72 AIFADVAIQFFGIASVFFLPPPTMWALSLLFDKKIYCFSKRATAWLINILVSATFFASFSPSQSWPIQN 140 (806)
Q Consensus 72 A~iAd~L~~lFG~~Ayllpl~Ll~~g~~ll~~k~~~~~~~Rl~~~il~ll~~s~ll~~~~~~~~~~l~~ 140 (806)
T Consensus 18 l~~a~~~~Ww~d~~~~~~Pl~lgiiAagL~~~d~rl~GRLk~l~itl~~F~~aS~~v~Ll~~~p~~~~~ 86 (724)
T TIGR01667 18 LAGAELLIWWFDLVKLLIPLILGIIAAGLDDLDDRLLGRLKNLIITLLCFSIASFLVQLLFPKPWLFVV 86 (724)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
T ss_conf 998888754641588877899987886403600256537999999999999999999875366068999