HHsearch alignment for GI: 254780799 and conserved domain: TIGR02533

>TIGR02533 type_II_gspE general secretory pathway protein E; InterPro: IPR013369 GspE, the E protein of the type II secretion system, is also referred to as the main terminal branch of the general secretion pathway. ; GO: 0005524 ATP binding, 0008565 protein transporter activity, 0015628 protein secretion by the type II secretion system, 0015627 type II protein secretion system complex.
Probab=93.24  E-value=0.034  Score=36.12  Aligned_cols=70  Identities=34%  Similarity=0.554  Sum_probs=47.3

Q ss_pred             HCCCCCCCCCCCCEEEEEECCCCCCEEEEHHHCCCHHHHHCCCCCHHHCCCCCCCCEEEEECCCCCE--EEEEECCCCHH
Q ss_conf             0012100038861255530245662387342307213430221000210456666667854100202--35530477406
Q gi|254780799|r  390 AISARVAVIPRRNAIGIELPNDIRETVMLRDLIVSRVFEKNQCDLAINLGKSIEGKPIIADLARMPH--LLIAGTTGSGK  467 (806)
Q Consensus       390 a~svRIapIPGK~~VGIEiPN~~r~~V~lreil~s~~f~~s~~~L~iaLGKdI~G~pvv~DLakMPH--LLIAGtTGSGK  467 (806)
T Consensus       194 ~~DiRVSt~P----------t~fGERvVMR-LLDK~---~~~l~L~-~LGm~~~~l~~~~~li~rpHGIiLVTGPTGSGK  258 (495)
T TIGR02533       194 DIDIRVSTVP----------TSFGERVVMR-LLDKD---AVRLDLE-ALGMSPELLSSLERLIKRPHGIILVTGPTGSGK  258 (495)
T ss_pred             EEEEEEEECC----------CCCCCEEEHH-HHCHH---HHHHHHH-HCCCCHHHHHHHHHHHHCCCCEEEECCCCCCCH
T ss_conf             4667885305----------8997100000-11204---7777588-648888899999999718896188417789852


Q ss_pred             HHHHHHH
Q ss_conf             7999999
Q gi|254780799|r  468 SVAINTM  474 (806)
Q Consensus       468 SV~iN~i  474 (806)
T Consensus       259 tTTLYaa  265 (495)
T TIGR02533       259 TTTLYAA  265 (495)
T ss_pred             HHHHHHH
T ss_conf             5889999