HHsearch alignment for GI: 254780799 and conserved domain: cd01850
>cd01850 CDC_Septin CDC/Septin. Septins are a conserved family of GTP-binding proteins associated with diverse processes in dividing and non-dividing cells. They were first discovered in the budding yeast S. cerevisiae as a set of genes (CDC3, CDC10, CDC11 and CDC12) required for normal bud morphology. Septins are also present in metazoan cells, where they are required for cytokinesis in some systems, and implicated in a variety of other processes involving organization of the cell cortex and exocytosis. In humans, 12 septin genes generate dozens of polypeptides, many of which comprise heterooligomeric complexes. Since septin mutants are commonly defective in cytokinesis and formation of the neck formation of the neck filaments/septin rings, septins have been considered to be the primary constituents of the neck filaments. Septins belong to the GTPase superfamily for their conserved GTPase motifs and enzymatic activities.
Probab=94.64 E-value=0.021 Score=37.65 Aligned_cols=154 Identities=19% Similarity=0.291 Sum_probs=78.7
Q ss_pred EEEEEECCCCHHHHHHHHHHHHHHHHCCHHH-------EEEEEECCCHHHHHHCCCCHHHHCCCCCCH---HHH--HHHH
Q ss_conf 2355304774067999999999998299578-------478885231001110277034312233430---456--6899
Q gi|254780799|r 456 HLLIAGTTGSGKSVAINTMILSLLYRMTPAQ-------CRLIMIDPKMLELSVYDGIPNLLTPVVTNP---QKA--VTVL 523 (806)
Q Consensus 456 HLLIAGtTGSGKSV~iN~iI~SlLyk~~P~e-------vkliliDPK~vEls~Y~~iPHLl~pVvTd~---~kA--~~aL 523 (806)
T Consensus 6 nimVvG~sGlGKsTfiNtLf~~~~~~~~~~~~~~~~~~~~t~~i~~~~~~i~e-~g~~l~Lt-viDTpGfGd~i~n~~~~ 83 (276)
T cd01850 6 NIMVVGESGLGKSTFINTLFNTKLIPSDYPPDPAEEHIDKTVEIKSSKAEIEE-NGVKLKLT-VIDTPGFGDNINNSDCW 83 (276)
T ss_pred EEEEECCCCCCHHHHHHHHHCCCCCCCCCCCCCHHHCCCCCCEEEEEEEEEEE-CCEEEEEE-EEECCCCCCCCCHHHHH
T ss_conf 99997689998899999974785778777788132056888258999999963-99899999-99768841223603409
Q ss_pred HHHHHHHHHHHHHH--HHCCCCCHHHHHHHHHHHHHCCCCCCCCCCCC--CCCCCCCCCCCCCCCCC----CCCCEEEEE
Q ss_conf 99999999999999--87089968999999998874478667754467--76545432223322323----469868776
Q gi|254780799|r 524 KWLVCEMEERYQKM--SKIGVRNIDGFNLKVAQYHNTGKKFNRTVQTG--FDRKTGEAIYETEHFDF----QHMPYIVVV 595 (806)
Q Consensus 524 ~w~V~EMe~RY~l~--a~~~vRni~~yN~k~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~lp~ivvi 595 (806)
T Consensus 84 ~~I~~yI~~qf~~yl~eE~~i~R~~~~-------------~D~RVH~cLYFI~Ptgh~L~~lDi~~mk~Ls~~vNvIPVI 150 (276)
T cd01850 84 KPIVDYIDDQFDQYLREESRIKRNPRI-------------PDTRVHACLYFIEPTGHGLKPLDIEFMKRLSKRVNIIPVI 150 (276)
T ss_pred HHHHHHHHHHHHHHHHHHHCCCCCCCC-------------CCCCEEEEEEEECCCCCCCCHHHHHHHHHHCCCCCEEEEE
T ss_conf 999999999999999998531457888-------------7774489999967888888799999999962756456678
Q ss_pred HHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEE
Q ss_conf 344688887321005889999998664142379
Q gi|254780799|r 596 IDEMADLMMVARKDIESAVQRLAQMARASGIHV 628 (806)
Q Consensus 596 iDElaDlmm~~~~~ve~~i~rlaq~ara~GiHl 628 (806)
T Consensus 151 a--KADtl--T~~El~~~K~~I~~~l~~~~I~i 179 (276)
T cd01850 151 A--KADTL--TPEELKEFKQRIMEDIEEHNIKI 179 (276)
T ss_pred E--CCCCC--CHHHHHHHHHHHHHHHHHCCCCE
T ss_conf 5--16669--99999999999999999859635