HHsearch results for GI: 254780799 and protein with PDBid: 1e9r_A
>1e9r_A Conjugal transfer protein TRWB; coupling protein, bacterial conjugation, F1-ATPase-like quaternary structure, ring helicases; 2.4A {Escherichia coli} SCOP: c.37.1.11 PDB: 1e9s_A 1gki_A* 1gl7_A* 1gl6_A*
Probab=98.96 E-value=2.4e-08 Score=80.49 Aligned_cols=63 Identities=25% Similarity=0.401 Sum_probs=47.1
Q ss_pred CEEEEEHHHHHHHHHHCCCHHHHHHHHHHHHHHHCCEEEEEEECCCC-CCCC-----CHHHHHCCCCEEEEEECC
Q ss_conf 86877634468888732100588999999866414237999965777-5355-----435541102515876458
Q gi|254780799|r 590 PYIVVVIDEMADLMMVARKDIESAVQRLAQMARASGIHVIMATQRPS-VDVI-----TGTIKANFPTRISFQVSS 658 (806)
Q Consensus 590 p~ivviiDElaDlmm~~~~~ve~~i~rlaq~ara~GiHli~aTqrPs-vdvi-----tg~ikan~p~riaf~v~s 658 (806)
+.+++++||++-|. + + ..+.++...+|-.|+.+++|||.|+ .+-+ .-.|-+|..++|-|++.+
T Consensus 279 ~~~~~~lDE~~~l~----~-~-~~~~~~l~~~Rk~G~~~~l~~Qs~~Ql~~~yG~~~a~~i~~n~~t~i~~~~~~ 347 (437)
T 1e9r_A 279 RRLWLFIDELASLE----K-L-ASLADALTKGRKAGLRVVAGLQSTSQLDDVYGVKEAQTLRASFRSLVVLGGSR 347 (437)
T ss_dssp CCEEEEESCGGGSC----B-C-SSHHHHHHHCTTTTEEEEEEESCHHHHHHHHCHHHHHHHHTTCCEEEEEECCT
T ss_pred CEEEEEECHHHHHC----C-C-HHHHHHHHHHCCCCCEEEEEECCHHHHHHHHHHHHHHHHHHHCCCEEEECCCC
T ss_conf 70799710044425----6-3-87999999850789458999567999999877889999997478779961799